PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G084900.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

G2-like

Protein Properties

Length: 366aa MW: 41753.5 Da PI: 8.6198

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G084900.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.4	2.8e-32	78	131	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH rFv+ave+LGG+e+AtPk++l++m++kgL+++hvkSHLQ++R+ Aqcoe2G084900.1.p 78 PRLRWTPDLHLRFVHAVERLGGQERATPKQVLQMMNIKGLSIAHVKSHLQMFRS 131 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.7E-29	74	132	IPR009057	Homeodomain-like
PROSITE profile	PS51294	11.783	74	134	IPR017930	Myb domain
SuperFamily	SSF46689	3.76E-15	75	132	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.1E-23	78	133	IPR006447	Myb domain, plants
Pfam	PF00249	8.1E-9	79	129	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence Send to blast
MSSMVIEATE EVRSKMKDSV SSDGNSITKS LENIEDKEDE VDQEQPMNGS SSSNSTVEEN 60 ERNKSSTGVR QYVRSKTPRL RWTPDLHLRF VHAVERLGGQ ERATPKQVLQ MMNIKGLSIA 120 HVKSHLQMFR SKKIDDQGQV INDRRHLMGS WDHNIHNPRQ LDHMLQGFTH RLASNYSDAS 180 WTTSHMSLAH SLCNGRENNV RDRLRYYASL AERNFAGSSS ERKTSLSTNF LVRNEPNSMT 240 TSRLHADQFQ LRYLQHSCQP LLEQRLRESS YISQSNARRE HMKSLNNADT TICRITQEER 300 NMTAKRKVED CDLDLNLSLN VRPGRSSDWT KGLGEEDTDI NLSLSLLPPS KKGKNSIDLN 360 NLQAE*

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence Send to blast

MSSMVIEATE EVRSKMKDSV SSDGNSITKS LENIEDKEDE VDQEQPMNGS SSSNSTVEEN  60
ERNKSSTGVR QYVRSKTPRL RWTPDLHLRF VHAVERLGGQ ERATPKQVLQ MMNIKGLSIA  120
HVKSHLQMFR SKKIDDQGQV INDRRHLMGS WDHNIHNPRQ LDHMLQGFTH RLASNYSDAS  180
WTTSHMSLAH SLCNGRENNV RDRLRYYASL AERNFAGSSS ERKTSLSTNF LVRNEPNSMT  240
TSRLHADQFQ LRYLQHSCQP LLEQRLRESS YISQSNARRE HMKSLNNADT TICRITQEER  300
NMTAKRKVED CDLDLNLSLN VRPGRSSDWT KGLGEEDTDI NLSLSLLPPS KKGKNSIDLN  360
NLQAE*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	6e-17	79	133	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	6e-17	79	133	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	6e-17	79	133	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	6e-17	79	133	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00297	DAP	Transfer from AT2G38300	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019077022.1	1e-75	PREDICTED: putative Myb family transcription factor At1g14600
TrEMBL	A0A2G5EUY4	0.0	A0A2G5EUY4_AQUCA; Uncharacterized protein
STRING	Aquca_004_00431.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-49	G2-like family protein

Link Out ? help Back to Top
Phytozome	Aqcoe2G084900.1.p