PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G092700.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

MYB_related

Protein Properties

Length: 116aa MW: 13132.4 Da PI: 9.976

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G092700.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.2	4.4e-14	31	75	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +W++eE++l++ + k++G+g+W+ I+r + +Rt+ q+ s+ qky Aqcoe2G092700.1.p 31 PWSEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKY 75 7***************************99**********8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	16.509	23	80	IPR017930	Myb domain
SuperFamily	SSF46689	1.42E-16	25	81	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.3E-16	27	78	IPR006447	Myb domain, plants
SMART	SM00717	6.6E-11	28	78	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	7.7E-12	31	73	IPR009057	Homeodomain-like
CDD	cd00167	8.67E-11	31	75	No hit	No description
Pfam	PF00249	1.2E-12	31	75	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 116 aa Download sequence Send to blast
MSDLSKLTVN EKSSSSSSSE YFDQGKKKAI PWSEEEHKLF LLGLKKYGKG DWRNISRNFV 60 ITRTPTQVAS HAQKYDTRQQ RLETRSNDNT SNTTTAANME NGDHSNNIRL FPGYN*

Functional Description ? help Back to Top
Source	Description
UniProt	Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269\|PubMed:11937495, ECO:0000269\|PubMed:9118809}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020221325.1	4e-30	transcription factor DIVARICATA
Swissprot	Q8S9H7	2e-30	DIV_ANTMA; Transcription factor DIVARICATA
TrEMBL	A0A2G5EUV1	3e-80	A0A2G5EUV1_AQUCA; Uncharacterized protein
STRING	Aquca_004_00370.1	5e-81	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58900.1	9e-19	Homeodomain-like transcriptional regulator

Link Out ? help Back to Top
Phytozome	Aqcoe2G092700.1.p

Publications ? help Back to Top
Galego L,Almeida J Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers. Genes Dev., 2002. 16(7): p. 880-91 [PMID:11937495] Almeida J,Rocheta M,Galego L Genetic control of flower shape in Antirrhinum majus. Development, 1997. 124(7): p. 1387-92 [PMID:9118809]