PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G141600.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bZIP

Protein Properties

Length: 512aa MW: 56758.4 Da PI: 6.8364

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G141600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.3	1e-10	202	243	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L Aqcoe2G141600.1.p 202 AKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLSQLEQDL 243 6889*************************9888887777666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.7E-8	199	275	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.7E-8	200	245	No hit	No description
PROSITE profile	PS50217	9.151	201	245	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.8E-8	202	244	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.5E-7	203	245	No hit	No description
PROSITE pattern	PS00036	0	206	221	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.6E-31	283	358	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence Send to blast
MESHRGGVID LSNSVSSSQH ISPYAMFHGF NTSSATNFIN QQGDGFDFGE LEEAIVLQGV 60 IKTGNDEAKK TFYSTRPAAT LEMFPSWPIR FQQTPRGSSK SGEDSTDSGS AQNNNLSSYK 120 ADTQFEPESP ISKKASNQNL DHKQLQQQQQ LVEMASDTLR AGTGTGTGVG GGPPPQVQNQ 180 HQTKPLEKRK GAGSTSDKPL DAKTLRRLAQ NREAARKSRL RKKAYVQQLE TSRIKLSQLE 240 QDLQRARSQG LFLAGGGAGG SLSSDAAIFD MEYARWLEDD HRHMSELRTA LQAHLSDGDL 300 RMITDGYLSH YDEIFRLKGI AAKSDVFHLI TGMWITPAER CFLWMGGFRP SELIKILMPQ 360 LDPLTEQQLM GICNLQQSSQ QAEDALSQGL EQLHQSLADT IATGSLCDGS NVDDYMGQMA 420 LALGKLSNLE GFVHQADNLR QQTLHQLRRI LTVRQAARCF LAIGEYYNRL RALSSLWASR 480 PREHMISDDN SCQTTSDLQM VQHQQSHFSN Y*

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence Send to blast

MESHRGGVID LSNSVSSSQH ISPYAMFHGF NTSSATNFIN QQGDGFDFGE LEEAIVLQGV  60
IKTGNDEAKK TFYSTRPAAT LEMFPSWPIR FQQTPRGSSK SGEDSTDSGS AQNNNLSSYK  120
ADTQFEPESP ISKKASNQNL DHKQLQQQQQ LVEMASDTLR AGTGTGTGVG GGPPPQVQNQ  180
HQTKPLEKRK GAGSTSDKPL DAKTLRRLAQ NREAARKSRL RKKAYVQQLE TSRIKLSQLE  240
QDLQRARSQG LFLAGGGAGG SLSSDAAIFD MEYARWLEDD HRHMSELRTA LQAHLSDGDL  300
RMITDGYLSH YDEIFRLKGI AAKSDVFHLI TGMWITPAER CFLWMGGFRP SELIKILMPQ  360
LDPLTEQQLM GICNLQQSSQ QAEDALSQGL EQLHQSLADT IATGSLCDGS NVDDYMGQMA  420
LALGKLSNLE GFVHQADNLR QQTLHQLRRI LTVRQAARCF LAIGEYYNRL RALSSLWASR  480
PREHMISDDN SCQTTSDLQM VQHQQSHFSN Y*

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001289788.1	0.0	transcription factor TGA2
Refseq	XP_010244798.1	0.0	PREDICTED: transcription factor TGA2 isoform X1
Refseq	XP_010244803.1	0.0	PREDICTED: transcription factor TGA2 isoform X1
Swissprot	Q93XM6	0.0	TGA9_ARATH; Transcription factor TGA9
TrEMBL	A0A2G5ETI2	0.0	A0A2G5ETI2_AQUCA; Uncharacterized protein (Fragment)
STRING	Aquca_004_00127.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	0.0	bZIP family protein

Link Out ? help Back to Top
Phytozome	Aqcoe2G141600.1.p

Publications ? help Back to Top
Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]