PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G141600.3.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bZIP

Protein Properties

Length: 359aa MW: 39925.1 Da PI: 7.9669

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G141600.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34	6.5e-11	49	90	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L Aqcoe2G141600.3.p 49 AKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLSQLEQDL 90 6889*************************9888887777666 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.7E-8	46	122	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.1E-8	47	92	No hit	No description
PROSITE profile	PS50217	9.151	48	92	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.8E-8	49	91	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.5E-7	50	92	No hit	No description
PROSITE pattern	PS00036	0	53	68	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	9.0E-32	130	205	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence Send to blast
MASDTLRAGT GTGTGVGGGP PPQVQNQHQT KPLEKRKGAG STSDKPLDAK TLRRLAQNRE 60 AARKSRLRKK AYVQQLETSR IKLSQLEQDL QRARSQGLFL AGGGAGGSLS SDAAIFDMEY 120 ARWLEDDHRH MSELRTALQA HLSDGDLRMI TDGYLSHYDE IFRLKGIAAK SDVFHLITGM 180 WITPAERCFL WMGGFRPSEL IKILMPQLDP LTEQQLMGIC NLQQSSQQAE DALSQGLEQL 240 HQSLADTIAT GSLCDGSNVD DYMGQMALAL GKLSNLEGFV HQADNLRQQT LHQLRRILTV 300 RQAARCFLAI GEYYNRLRAL SSLWASRPRE HMISDDNSCQ TTSDLQMVQH QQSHFSNY*

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence Send to blast

MASDTLRAGT GTGTGVGGGP PPQVQNQHQT KPLEKRKGAG STSDKPLDAK TLRRLAQNRE  60
AARKSRLRKK AYVQQLETSR IKLSQLEQDL QRARSQGLFL AGGGAGGSLS SDAAIFDMEY  120
ARWLEDDHRH MSELRTALQA HLSDGDLRMI TDGYLSHYDE IFRLKGIAAK SDVFHLITGM  180
WITPAERCFL WMGGFRPSEL IKILMPQLDP LTEQQLMGIC NLQQSSQQAE DALSQGLEQL  240
HQSLADTIAT GSLCDGSNVD DYMGQMALAL GKLSNLEGFV HQADNLRQQT LHQLRRILTV  300
RQAARCFLAI GEYYNRLRAL SSLWASRPRE HMISDDNSCQ TTSDLQMVQH QQSHFSNY*

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001289788.1	0.0	transcription factor TGA2
Refseq	XP_010244798.1	0.0	PREDICTED: transcription factor TGA2 isoform X1
Refseq	XP_010244803.1	0.0	PREDICTED: transcription factor TGA2 isoform X1
Swissprot	Q93XM6	1e-176	TGA9_ARATH; Transcription factor TGA9
TrEMBL	A0A2G5ETF6	0.0	A0A2G5ETF6_AQUCA; Uncharacterized protein
TrEMBL	A0A2G5ETI2	0.0	A0A2G5ETI2_AQUCA; Uncharacterized protein (Fragment)
STRING	Aquca_004_00127.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.2	1e-170	bZIP family protein

Link Out ? help Back to Top
Phytozome	Aqcoe2G141600.3.p

Publications ? help Back to Top
Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]