PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G156500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family FAR1
Protein Properties Length: 935aa    MW: 107330 Da    PI: 8.6226
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G156500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR162.31.4e-19246335291
               FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                        fYneYAk  GFsvrk++++    +g++ +r+f Cs+ g+r+++ ++ ++++++ r  tr++C a l++  ++  ++w v ++++eH+H lap
  Aqcoe2G156500.1.p 246 FYNEYAKFKGFSVRKDHKTVI--KGKTCRRRFICSCAGQRANKWSNlQRRRKKARRLTRCDCPALLNIVYSEeVNTWIVLDFKSEHSHVLAP 335
                        9**************997766..8889***************99995667777999***********9999889**************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.140.402.1E-933118IPR006501Pectinesterase inhibitor domain
SuperFamilySSF1011484.05E-734118IPR006501Pectinesterase inhibitor domain
PfamPF031015.0E-17246335IPR004330FAR1 DNA binding domain
PfamPF105518.9E-33456550IPR018289MULE transposase domain
PROSITE profilePS5096610.658734770IPR007527Zinc finger, SWIM-type
SMARTSM005751.0E-5745772IPR006564Zinc finger, PMZ-type
PfamPF044346.0E-6746768IPR007527Zinc finger, SWIM-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0004857Molecular Functionenzyme inhibitor activity
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 935 aa     Download sequence    Send to blast
MACDLVKSFL IVALLVLIMF SHPSSAKVGE QITSDLVSKY CLETRDAKLC VEILNGASFI  60
SLADLYSTVD IAIRVATNKV AEMGRYAKTM MLKDTELKKE FTMCSMKYDN ALTTLVVAIT  120
CECFHLLYQL KTVFYKTKLQ ALSPFVLLPA NQRIPLCFSL KGNNFSHWSY CSRYHIMSTY  180
NVDEFVEEFS DDDSEAESEI PRRRNIDLLC QVGVRLQQEI HEDMGQFSDA DILDARFDTD  240
EEAYLFYNEY AKFKGFSVRK DHKTVIKGKT CRRRFICSCA GQRANKWSNL QRRRKKARRL  300
TRCDCPALLN IVYSEEVNTW IVLDFKSEHS HVLAPTDGSQ FLRSHRKVSV SNALLAEGLY  360
GLGVSKKKVM DLIVARAGSH AAAGCTKRDL YNQMNRSRVE RILDGDANVV NAYMEDMSMN  420
DPGFFKKHQV NEKQQLTKLF WSDSQSQEDY KLFGDVLLFD STYRTNRYGM PLVVFAGVNN  480
HRHTVIFALA LMNTETIESY IWALEAFIAA MDNVAPKSVI TDGDAAIRSS IETVLPNSKH  540
RLCVWHVVQN SLTNVRTQGF HKDFVDVMFC KGPPENFEKK WGELLTKFNN VAKKKWVHNI  600
YLKKEMWAEG YLREYFFAGC RSNQRCESIN SVVRLCVKAG LTLIELVERL LIKVKYIRHR  660
DFEAEVNTMM TRSAQIPNLS RIGERAEALY TRAGYEYLYK QLLHEPSYVV NETYEDGVNI  720
KYLVNRHMYP NSPQTVEYMR DTDAYKCSCK LFERVGFICR HILAVLKHTH VSQIPKSCIL  780
HRWTRDAKSS SMTDVRTNSS SWMLGSGLRL NDLEDCAREL FMWACESVQR CSRVKSHIAA  840
FDKGESEEVA QGLNQTPILD NPMGVEEKRA STPTHVGLPP DNITDPPLYR GKRVAKRKIW  900
QRCTTRCGIC LIVYLVMMRS LIMNRILREV ELLT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EJ870.0A0A2G5EJ87_AQUCA; Uncharacterized protein
STRINGAquca_007_00263.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-87FAR1-related sequence 5