PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G165200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family MYB_related
Protein Properties Length: 437aa    MW: 51166.5 Da    PI: 7.4118
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G165200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.91e-07229261237
                        SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS
    Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtl 37 
                          WT+eE ell + ++++G++ Wk  a++ g  +++
  Aqcoe2G165200.1.p 229 REWTPEEKELLRKFHEEHGSD-WKHFAAEYG--KSR 261
                        68*******************.**9999998..444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.0073154225IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.9E-6157243IPR009057Homeodomain-like
PROSITE profilePS500907.294223272IPR017877Myb-like domain
SMARTSM007170.0024227274IPR001005SANT/Myb domain
SuperFamilySSF466891.28E-8228289IPR009057Homeodomain-like
PfamPF139211.3E-9231289No hitNo description
Gene3DG3DSA:1.10.10.607.1E-9244283IPR009057Homeodomain-like
PROSITE profilePS500907.991273341IPR017877Myb-like domain
SMARTSM007170.014277343IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-7284341IPR009057Homeodomain-like
SuperFamilySSF466896.69E-7321399IPR009057Homeodomain-like
PROSITE profilePS500906.876343396IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 437 aa     Download sequence    Send to blast
MTVNGEELVG EKGIGETNVS RKRKLVSEEH VEEQRNDSEL GVLKKEKKRK KEKKEKDKGS  60
SDVDESMRKK ANSVKDKEVN EGESTTKDKE DGVDCSGNPE SKKPSKRVKF SKNIEVFPLS  120
DEDLDPGKKT SNPRKKRVDR GSTDVNRDKK DSNHGKRFTK EEDCIIQNAV LNYIKEHDLG  180
DNGLEKILHC QGHPEVKNCW KEIVTCMDWR SKTSIYSRAH ILFERAEKRE WTPEEKELLR  240
KFHEEHGSDW KHFAAEYGKS RIHTKDTWRR ICLPNHKKGH WSQDEYQKLF DLVNMDLLMK  300
VYDEKKSKHG MLRDNISWEA ISQRLSTRTM AECCTKWYYQ LESPLIRAEL WANTDDILML  360
NALNERDFSS EEEVDWDNLL EHRSGDLCRK RWQQMVKHLG EHGLKEFADQ VETLANRYSV  420
DVLEARKIYQ EKTPVD*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14650KKRKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010682330.11e-138PREDICTED: DNA-binding protein REB1-like isoform X1
RefseqXP_010682331.11e-138PREDICTED: DNA-binding protein REB1-like isoform X1
RefseqXP_010682332.11e-138PREDICTED: cyclin-D-binding Myb-like transcription factor 1 isoform X2
TrEMBLA0A2G5CRU60.0A0A2G5CRU6_AQUCA; Uncharacterized protein
STRINGAquca_039_00038.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-104MYB_related family protein