PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G178300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 314aa    MW: 35678.3 Da    PI: 8.401
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G178300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.24.5e-062102481154
                        HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        +R ++i ++   L++l+ +      +K + a++L++A+ YI++L
  Aqcoe2G178300.1.p 210 KRSQKISDKVTALQKLVSPF-----GKTDTASVLQEACTYIRYL 248
                        7999*************998.....8*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.588199248IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003530.0016202254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.14E-10210262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.97E-5210253No hitNo description
Gene3DG3DSA:4.10.280.101.5E-8214256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MPLYFPSKGR LHIISEHHNS FGFSQKTDCR EDIKEYLDQL AYQGIAGTKR MKNSSCYPCY  60
NSTQLCSFGN NEIQMPTPLT NISLNVCESN FFHESGVCND IHLGNFDPLS TMEIPQSFNS  120
HLSGWLTTTN ATAASTLDKT WQLYSERSRS SVSDMEALDI ENGRKRKMKC KSTEEERHMD  180
ELKKNKVVCM EDRNTKERPL ENQEKKAPVK RSQKISDKVT ALQKLVSPFG KTDTASVLQE  240
ACTYIRYLHE QIEMLSAPYF AITPLHSQGQ RRSNWDLSSR GLCLVPLSFT KDLTKADQVE  300
RSASRGTTVS RKY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31730.13e-24bHLH family protein