PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G179300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family C2H2
Protein Properties Length: 178aa    MW: 20053.8 Da    PI: 8.7842
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G179300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.0005588110123
                        EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                        ++C++Cg  F+    L  H+r+H
  Aqcoe2G179300.1.p  88 HECSICGLEFTVGQALGGHMRRH 110
                        78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.41E-837110No hitNo description
PfamPF139128.0E-123863IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.2423966IPR007087Zinc finger, C2H2
SMARTSM003550.693961IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002804161IPR007087Zinc finger, C2H2
PfamPF139122.9E-1087112IPR007087Zinc finger, C2H2
PROSITE profilePS501579.3988115IPR007087Zinc finger, C2H2
SMARTSM003550.1688110IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028090110IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MKRSRENTEN LTTMANCLMM LSQGGNRIDS ISHSSSRVFE CRTCNRQFQS FQALGGHRAS  60
HKKPRQIEEE DLSDRKGQIL ITSSKKVHEC SICGLEFTVG QALGGHMRRH RATASDQSSC  120
VSSVPTPQVV PLFNRSNSKR ILCLDLNLTP LENDDLEYPI RNRVPERIQS PMIYCFI*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022743218.15e-55zinc finger protein ZAT12-like
SwissprotQ9SLD47e-39ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A2G5EB991e-128A0A2G5EB99_AQUCA; Uncharacterized protein
STRINGAquca_010_00703.11e-129(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.11e-41C2H2 family protein