PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G179500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family C2H2
Protein Properties Length: 173aa    MW: 18769.6 Da    PI: 11.083
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G179500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.000632749123
                       EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                       ++C+ C+++Fs+   L  H  +H
  Aqcoe2G179500.1.p 27 FVCKTCNRHFSSFQALGGHRASH 49
                       89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.99E-92596No hitNo description
PfamPF139122.8E-102751IPR007087Zinc finger, C2H2
SMARTSM003550.352749IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.8892754IPR007087Zinc finger, C2H2
PROSITE patternPS0002802949IPR007087Zinc finger, C2H2
PfamPF139125.7E-107398IPR007087Zinc finger, C2H2
SMARTSM003550.57496IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.9127496IPR007087Zinc finger, C2H2
PROSITE patternPS0002807696IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MAADCLMLLS HQGEMIESLN RSSNRSFVCK TCNRHFSSFQ ALGGHRASHK KPRGIGGDQI  60
HQVLSSSQTK SKAHECSICG LEFAIGQALG GHMRRHRAIM SSSSSKSFTT TNPPPLPSKV  120
TSVPAVFRRS NSSKRIVSLD LNLTPLENGL EFRPIKVGFL ANIKSPVIHS FI*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016496196.13e-52PREDICTED: zinc finger protein ZAT11-like
SwissprotQ9SLD45e-38ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A2G5EBS21e-122A0A2G5EBS2_AQUCA; Uncharacterized protein
STRINGAquca_010_00704.11e-123(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.13e-40C2H2 family protein