PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G182800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 322aa    MW: 36711.6 Da    PI: 4.988
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G182800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-19112163156
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                        ++ykGVr++k +g+W+AeIrdp    +r  r +lg+++tae+A +a+ +a+kkle+e
  Aqcoe2G182800.1.p 112 PHYKGVRQRK-WGKWAAEIRDP----IRgVRKWLGTYDTAEKALEAYQNAAKKLEQE 163
                        68*******9.**********7....246*************************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-12112163IPR001471AP2/ERF domain
CDDcd000182.17E-23112171No hitNo description
SMARTSM003802.3E-25113176IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-22113171IPR001471AP2/ERF domain
PROSITE profilePS5103219.493113170IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-17113170IPR016177DNA-binding domain
PRINTSPR003672.3E-8114125IPR001471AP2/ERF domain
PRINTSPR003672.3E-8136152IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MPEPQRQLSK QVKVIQKPKK KSITNEIRLE TQKVRKIRVI CNDPDATDSS SDEDESSGNK  60
YRKGCNKRFI MEFNTPIRSS EIESSHQDSK YSGQSSKNPL HKIIRKNSRS SPHYKGVRQR  120
KWGKWAAEIR DPIRGVRKWL GTYDTAEKAL EAYQNAAKKL EQEMESIGFS DKRHNKTKSS  180
SSPTGSVSHS SISEDNNDCG MNYTVKQEDI TVSPETTELP EVQQHQQLTT DIFDEQMVTT  240
GYDQELDIRC ELESFSMNDF SMNDLGQVFN DDFGTFEDFP PLPGVNDDYN IDDILNLDFN  300
LGAEELSWIE EHLNIVSPSV L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A1e-14113169259ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5EBC70.0A0A2G5EBC7_AQUCA; Uncharacterized protein
STRINGAquca_010_00731.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.23e-24ERF family protein