PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G184300.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Trihelix
Protein Properties Length: 723aa    MW: 82153.1 Da    PI: 6.7341
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G184300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix75.11.2e-23115216186
           trihelix   1 rWtkqevlaLiearremeerlrrgk...............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsess 76 
                        +Wt+++v++Li a+ ++++++  ++               ++k++W++vsk+m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++
  Aqcoe2G184300.1.p 115 KWTDNMVRTLIMAVYYIGDDFCLDAhdppginkkksgsmlQRKGKWKSVSKAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVV 206
                        7**************9999999765567777788899999**********************************************55**** PP

           trihelix  77 stcpyfdqle 86 
                        ++ +++d ++
  Aqcoe2G184300.1.p 207 ENQSLLDTMD 216
                        *******998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.9E-21113242No hitNo description
SMARTSM001291.3E-11485722IPR001752Kinesin motor domain
Gene3DG3DSA:3.40.850.103.3E-17537622IPR001752Kinesin motor domain
PfamPF002252.9E-15543618IPR001752Kinesin motor domain
SuperFamilySSF525407.97E-35555722IPR027417P-loop containing nucleoside triphosphate hydrolase
PRINTSPR003801.1E-14595616IPR001752Kinesin motor domain
PfamPF002255.6E-16624721IPR001752Kinesin motor domain
Gene3DG3DSA:3.40.850.101.1E-19624722IPR001752Kinesin motor domain
PROSITE profilePS5006719.233649722IPR001752Kinesin motor domain
PRINTSPR003801.1E-14670687IPR001752Kinesin motor domain
PRINTSPR003801.1E-14700718IPR001752Kinesin motor domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007018Biological Processmicrotubule-based movement
GO:0003777Molecular Functionmicrotubule motor activity
GO:0005524Molecular FunctionATP binding
GO:0008017Molecular Functionmicrotubule binding
Sequence ? help Back to Top
Protein Sequence    Length: 723 aa     Download sequence    Send to blast
MESNGLLPNL TCGMISLDIP LQPHNTQHHS SHIPNNSSSH HQQYPQHNQP MLAFTSHDPQ  60
CVKQSIYPTY PTTKGKQPQQ QQQQLVISDE DEPGFTADDG SGDGKKRVSP WQRVKWTDNM  120
VRTLIMAVYY IGDDFCLDAH DPPGINKKKS GSMLQRKGKW KSVSKAMMEK GFYVSPQQCE  180
DKFNDLNKRY KRVNDILGKG TACRVVENQS LLDTMDQLSL KMKDEARKLL NSKHLFFREM  240
CAYHNSGGVG GAVGAHQTAE LAVDVTHYQQ QQNPRCLHSS DGDQITDSRN RVVRGGMHEE  300
EVEEEEIEDN EEDDDEDEDS EDEEEIQLLG ENGKCLNDYK GGHEDGNNNG NFSLKRKQRS  360
MLSSPSSISP AIQQMSCELM SMLQDGTKSP WEQRQWMRTR SMQLEEQRVN YQFQAFDLEK  420
QQMKWFKFSS KKEREMERLK LNNERLRLES ERMVLILRQK ELELLDPHRQ NVAKKISDLY  480
FIAQKQGLRV FQRSSQVLTI ELVEHSKGWS SVEANTDSAE NVMMGVSEEE LYNIPSAEFV  540
HRRGAWRHRD PLKPHKNARK VFHFNRVFRQ HLANKMRYTV YKATDQPLTR SVMDGDNVCI  600
FAYGQTGSSG KTHTMCGPSG GSSKDMEIQN CTSNGGLSLL DATMHVVKSS MDDVLDLIKL  660
GEMNRFVSAT AINHQSSRSH SVLTVHAHGK DASGSILQNC LHLVDVAGSE RVDKSEVTGD  720
RL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1430439KKEREMERLK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021289063.11e-151transcriptional regulator EFH1 isoform X1
TrEMBLA0A2G5DIS61e-168A0A2G5DIS6_AQUCA; Uncharacterized protein
STRINGAquca_019_00079.11e-169(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10040.11e-67sequence-specific DNA binding transcription factors