PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G223600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 316aa    MW: 35708.4 Da    PI: 4.5608
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G223600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.88.2e-32117173258
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                        dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+vers+++p+++++tYeg H h
  Aqcoe2G223600.1.p 117 DDGYKWRKYGQKSIKNSPHPRSYYRCTNPRCSAKKQVERSSQEPETLIVTYEGLHLH 173
                        8******************************************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081127.175111173IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.4E-30112173IPR003657WRKY domain
SuperFamilySSF1182901.7E-26114173IPR003657WRKY domain
SMARTSM007745.0E-36116175IPR003657WRKY domain
PfamPF031063.9E-26117173IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MAIMENPGTR WFDESDDELI RELLDNESPF FVLPQTSETE ENLSLEPITD HLVTKTHSEP  60
TAVDIESELS ITSKNNESTE QSNTLQSRIA ILEERLVGKI DNKYTLKIKS CGNEMSDDGY  120
KWRKYGQKSI KNSPHPRSYY RCTNPRCSAK KQVERSSQEP ETLIVTYEGL HLHFTYTHFL  180
LNQPHLTYPP AKKSKTNTKQ AEAQQILEIE EAQTQQNQEN EEEQTQEVPT LFDPIPSIAA  240
MFDHQQDLWE VRSEGLLEDM VPLMIRRPSD TTTLSNPSSC SSSYPSSPPT SSSSSLNWSP  300
NISSIYGNGV TSSTP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A5e-221141731271WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010256886.13e-85PREDICTED: probable WRKY transcription factor 49
TrEMBLA0A2G5EX860.0A0A2G5EX86_AQUCA; Uncharacterized protein
STRINGAquca_003_00104.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43290.12e-38WRKY DNA-binding protein 49