PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G241500.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

Protein Properties

Length: 314aa MW: 35914.2 Da PI: 9.7844

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G241500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	35.1	2.4e-11	29	115	6	98
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +++++++s+++ +p +f+e +g k + l+l+ ++g W++k+ +k gr+ +GW++Fv+ + g + F++dg s+f v ++ Aqcoe2G241500.1.p 29 INESNMQSHQIEFPSEFVEVYGDK--LPEALVLKVRTGDFWNIKV--KKFVGRIRTLRGWQSFVEHYSIGFGYCLFFTYDGVSRF--DVVIC 114 5899999999******999877..6778***********..88888877778********************99999..88888 PP - CS B3 98 r 98 + Aqcoe2G241500.1.p 115 D 115 7 PP
2	B3	45.1	1.9e-14	220	312	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f ++ p++ +ks+ +++pk+f+ h g+ +s tl+ +e g++W v++ +++++ +tkG + F ++ ++k++D+++F+l++++++ Aqcoe2G241500.1.p 220 FTITMYPNYIFKSS-MTVPKSFMMCHlPGI--GSATLQ-VSEGGKKWPVEI--NNHRRVWRMTKGLSVFLRESNIKVRDTCLFELINKKDAL 305 55567777777777.******6666333..665666.56899***..*******************************999998 PP .EEEEE- CS B3 92 lvvkvfr 98 ++v++++ Aqcoe2G241500.1.p 306 FHVHIIS 312 9999876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.40.330.10	3.9E-16	20	115	IPR015300	DNA-binding pseudobarrel domain
SuperFamily	SSF101936	1.02E-16	21	116	IPR015300	DNA-binding pseudobarrel domain
PROSITE profile	PS50863	10.771	24	117	IPR003340	B3 DNA binding domain
SMART	SM01019	3.0E-7	25	117	IPR003340	B3 DNA binding domain
CDD	cd10017	1.52E-11	25	115	No hit	No description
Pfam	PF02362	7.8E-9	29	115	IPR003340	B3 DNA binding domain
Gene3D	G3DSA:2.40.330.10	3.6E-17	214	312	IPR015300	DNA-binding pseudobarrel domain
SuperFamily	SSF101936	2.75E-16	214	311	IPR015300	DNA-binding pseudobarrel domain
PROSITE profile	PS50863	9.714	219	313	IPR003340	B3 DNA binding domain
SMART	SM01019	5.2E-8	219	312	IPR003340	B3 DNA binding domain
CDD	cd10017	5.14E-12	219	312	No hit	No description
Pfam	PF02362	7.4E-13	220	312	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence Send to blast
MSELKGKQKG NCSSPSFAKM KRSKFFRVIN ESNMQSHQIE FPSEFVEVYG DKLPEALVLK 60 VRTGDFWNIK VKKFVGRIRT LRGWQSFVEH YSIGFGYCLF FTYDGVSRFD VVICDAGDTE 120 IDYPSKHHKF KNLIHEGTEL GESTSKECRK NSAKNLDVTS SKENIHQRTE IGEPSVYRAV 180 EDMAPKDVTA TKKVSFDTQA INPNENVQSA NVFKLKHPFF TITMYPNYIF KSSMTVPKSF 240 MMCHLPGIGS ATLQVSEGGK KWPVEINNHR RVWRMTKGLS VFLRESNIKV RDTCLFELIN 300 KKDALFHVHI ISQ*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5FBF3	1e-139	A0A2G5FBF3_AQUCA; Uncharacterized protein
STRING	Aquca_001_00601.1	1e-140	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	3e-28	B3 family protein

Link Out ? help Back to Top
Phytozome	Aqcoe2G241500.1.p