PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G256400.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family CAMTA
Protein Properties Length: 1038aa    MW: 116783 Da    PI: 7.0382
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G256400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1177.32e-55201362118
               CG-1   2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenpt 93 
                        l+ ++rwl+++e+++iL n++k++lt +++ +p+ gsl+L++rk +ryfrkDG++w+kkkdgktvrE+hekLK g+v+vl+cyYah+e+n++
  Aqcoe2G256400.1.p  20 LEAQNRWLRPNEVCEILRNYNKFHLTPDPPYKPPGGSLFLFDRKALRYFRKDGHTWRKKKDGKTVREAHEKLKAGSVDVLHCYYAHGEDNEN 111
                        5679**************************************************************************************** PP

               CG-1  94 fqrrcywlLeeelekivlvhylevk 118
                        fqrr+yw+L+++le+ivlvhy+evk
  Aqcoe2G256400.1.p 112 FQRRSYWMLDTQLEHIVLVHYREVK 136
                        **********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143781.90515141IPR005559CG-1 DNA-binding domain
SMARTSM010763.8E-7718136IPR005559CG-1 DNA-binding domain
PfamPF038599.5E-5021134IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.105.3E-7471559IPR013783Immunoglobulin-like fold
CDDcd001020.00133471559No hitNo description
SuperFamilySSF812962.97E-17472558IPR014756Immunoglobulin E-set
PfamPF018334.7E-5476557IPR002909IPT domain
CDDcd002046.53E-14638766No hitNo description
SuperFamilySSF484032.76E-15658769IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.99663768IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.2E-14664772IPR020683Ankyrin repeat-containing domain
SMARTSM002480.0056707736IPR002110Ankyrin repeat
PROSITE profilePS5008810.099707739IPR002110Ankyrin repeat
SMARTSM002481400746775IPR002110Ankyrin repeat
SuperFamilySSF525402.63E-8841934IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.23883905IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.718884913IPR000048IQ motif, EF-hand binding site
PfamPF006120.0026885904IPR000048IQ motif, EF-hand binding site
SMARTSM000153.2E-4906928IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.743907935IPR000048IQ motif, EF-hand binding site
PfamPF006127.6E-5910928IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.8159881016IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1038 aa     Download sequence    Send to blast
MAETRRHYLN QQLDITQILL EAQNRWLRPN EVCEILRNYN KFHLTPDPPY KPPGGSLFLF  60
DRKALRYFRK DGHTWRKKKD GKTVREAHEK LKAGSVDVLH CYYAHGEDNE NFQRRSYWML  120
DTQLEHIVLV HYREVKEGNR SATSRLLNQD PGTQTGSSQT CSALVDSTVL TVQASYASSP  180
STANYNGQTS YSELLEDVES KEEIGAPSLA EINTCSRCPN ATVQIFDRPG FSTSPRNQFG  240
SGYGGPCSIQ LSDSPGLPDI HNFSKNISSL LKQRFTDEQP SSADIVTRKF TGTKLEPYNS  300
LRDDFHGESM VSPDTLVEAL QRDSHTLFQE PLANKNANQV HFIPSEKHPL KETNGGFHIS  360
DEHDFRFLHP NYNSGSHMVN GCDLGFGKAS VKEELHSDDL GELKKLDSFG RWMNKEIGGD  420
CDDSLMASDS GNYWSTLDTQ NDDKEVSSLS RHMQLDNESL GPSLSQEQLF SICDCSPDWA  480
YSEVETKVLI TGTFLGDSKC SRTTEWCCMF GEVEVPAEIL NDNVLRCQAP LHTPGRVPFY  540
ITFSNRLACS EVREFEYREK PPGELPLAVT SEPEDEMRLQ IRFAKMLCLG INWKWLNCSI  600
ENCEKCNIKN DLFSTRHEGE NEWERIEKAS MSFERNHENH RYALIKKLLK DRLYEWLVCS  660
VHEEGKGPHI LDNEGLGVIH LAAALGYEWA MEPIVAVGVS PSFRDAHGRT GLHWAAYYGR  720
EEAVVALVKL GAAPGAVEDP TSMFPGGRTA ADLASSRGYK GIAGYLAEAD LASHLSALTV  780
KESVMESVAA TIAAEKAVET VEEQNVVPLD GDREWQLSLK GSLAAVRKSA QAAALIQASF  840
RARSFQYRQL TKNRDSVYQV PSDVAAIASF TNKTRKMGHF SDYLHSAAVK IQQKYRGWKG  900
RKEFIKTRNR IVKIQAHVRG HQVRKQYKKV IWSVSIVEKA ILRWRRKGVG LRGFRADSAI  960
GHSQPQIGKI DDYEFLRLGR KQKVAGVEKA LARVQSMVRY PEARDQYMRL ATNFQNSKIG  1020
GECPTDEDLP ALASMTF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010270930.10.0PREDICTED: calmodulin-binding transcription activator 2-like isoform X1
TrEMBLA0A2G5EYL10.0A0A2G5EYL1_AQUCA; Uncharacterized protein
STRINGAquca_003_00380.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains