PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G282600.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ARR-B
Protein Properties Length: 637aa    MW: 69424.2 Da    PI: 6.0691
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G282600.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like79.44.4e-25208257151
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                        kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQ
  Aqcoe2G282600.2.p 208 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQ 257
                        79*******************.***************************** PP
2Response_reg731.2e-24301381109
                        EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH CS
       Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal 90 
                        vl+vdD+p+ +++l+++l++  y ev +++ +  al +l+e++  +D++l D+ mp+mdG++ll++i  e  +lp+i+++  +++e + + +
  Aqcoe2G282600.2.p  30 VLVVDDDPTCLKILEKMLRNCLY-EVITCSRAVVALSMLRERTysFDIVLSDVHMPDMDGFKLLEHIGLEM-DLPVIMMSVDDKKEVVMKGV 119
                        89*********************.99*************999999**********************6654.8******************* PP

                        HTTESEEEESS--HHHHHH CS
       Response_reg  91 kaGakdflsKpfdpeelvk 109
                          Ga d+l Kp+ +e++++
  Aqcoe2G282600.2.p 120 THGACDYLIKPVRIEAIRN 138
                        ***************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23001.1E-4027166No hitNo description
SuperFamilySSF521723.56E-3427154IPR011006CheY-like superfamily
SMARTSM004482.6E-2728140IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011040.68829144IPR001789Signal transduction response regulator, receiver domain
PfamPF000725.1E-2230138IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.03E-2531143No hitNo description
SuperFamilySSF466893.94E-16205257IPR009057Homeodomain-like
PROSITE profilePS512949.395205270IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.2E-25206257IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-21208257IPR006447Myb domain, plants
PfamPF002494.5E-6210257IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009873Biological Processethylene-activated signaling pathway
GO:0010082Biological Processregulation of root meristem growth
GO:0010119Biological Processregulation of stomatal movement
GO:0010150Biological Processleaf senescence
GO:0071368Biological Processcellular response to cytokinin stimulus
GO:0080113Biological Processregulation of seed growth
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 637 aa     Download sequence    Send to blast
MLNMDSGGGG TSKKASGDGV SDQFPAGLRV LVVDDDPTCL KILEKMLRNC LYEVITCSRA  60
VVALSMLRER TYSFDIVLSD VHMPDMDGFK LLEHIGLEMD LPVIMMSVDD KKEVVMKGVT  120
HGACDYLIKP VRIEAIRNIW QHVVRKRRNE LKEFEQSGSY EDNDRNHKAS EDVDYASSVI  180
EGSWKGSKKR KEDEDDLEDR DDTSTMKKPR VVWSVELHQQ FVAAVNQLGI DKAVPKKILE  240
LMNVPGLTRE NVASHLQAGG LARSTVNTGI GMPHLDQRIP FSTEASKLRF GAGQQMTSSN  300
KQVDLYHGLP TNIEPKQLSH LHQSAQSSGS MGLQASEGTT GFMNLQTSLG THSMNQSGAV  360
LGSQSNSPLM MQMAQSRSRG QLLSDISSSH PSGTPLSIGQ QVFSNDMASR VLGKNITILN  420
GKATTYTPSF QASSMLDFQK KHTMDVPGNG FPVGITTGVS GLQSTGVFQD RGSLEVKGPR  480
SLPTGYVIFD EHPQHKSQEW GLQNVDLTFE ASQRPKPLQG NITFSPPVLA HQGLWSSQRG  540
GPNGNVSIVG NTLVSLSEGN QLGTSESFVQ RGNSLPMDSS FRVKAESMGD LNSDNIFAAK  600
TFDQDDLMSA ILKQQGGGQL ENDFNFDGYP IDDIPV*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A4e-19204257154ARR10-B
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00054PBMTransfer from AT4G16110Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010268090.10.0PREDICTED: two-component response regulator ARR2-like isoform X1
RefseqXP_010268091.10.0PREDICTED: two-component response regulator ARR2-like isoform X2
TrEMBLA0A2G5EZP70.0A0A2G5EZP7_AQUCA; Uncharacterized protein
STRINGAquca_003_00615.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-124response regulator 2