PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G290700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 283aa    MW: 32216.3 Da    PI: 4.565
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G290700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.21.2e-07153196855
                        HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        + r+RR++i ++ +eL +l+P a    ++ +s a++ + A +Y+++Lq
  Aqcoe2G290700.1.p 153 AARQRRRKISEKTQELGKLIPGA----NRMNSTADMFQAAYKYVQYLQ 196
                        569*******************9....899*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.23E-10145204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.42145195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.2E-10150202IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.33E-7151199No hitNo description
SMARTSM003531.6E-6151201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.9E-5154196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MFDMGGSFLY GQAQLGEELL IGKFYDDFVE SLFESNDADT NYTTSSSPSF MALPYLEYYP  60
FSGQSFVSLP SLEIDEQCYY LDCCCQYSKR RKTNYYYNDL HYSMNTFPQC PEEFLFPKTE  120
QFTQLPVPMI YENTAKKKSS SPGERSLSVQ SVAARQRRRK ISEKTQELGK LIPGANRMNS  180
TADMFQAAYK YVQYLQAQVG ILQLMESKDF VPNVEEQLEV LLASPTIQEK LYSEDKCLVP  240
QEFVEALAKD NYTIQSNPSD LSRHSVPAPS KCCAQQTNAQ II*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020268269.12e-45transcription factor bHLH53-like
TrEMBLA0A2G5F0A50.0A0A2G5F0A5_AQUCA; Uncharacterized protein
STRINGAquca_003_00697.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.11e-26bHLH family protein