PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G306500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 279aa    MW: 32227.9 Da    PI: 5.0896
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G306500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.23.2e-1981391127
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvka.eekewyfFskrdkkyatgkrknratksgyWkat 86 
                        +p G+rF+P+d ++  e+ +kk  + + +     + +++y +ePw Lp      ++ +   ++ y+F  +  ky    r +r++ +g+W a 
  Aqcoe2G306500.1.p   8 MPLGYRFRPRDIQIC-EFVAKKNIDPNYSSYPLCDGCNVYGAEPWVLPVvgaeaNMGKgLGEHQYYFDMS--KY----R-SRKAGRGRWLAN 91 
                        699**********88.888888888887776889**************4455442222123355777665..44....3.466788****** PP

                NAM  87 gkdkevlsk..kgelvglkktLvfy.....kgrapkgektdWvmheyr 127
                         kd ++l    k++++g k+ L+++     + ++++  kt+W+mheyr
  Aqcoe2G306500.1.p  92 TKDIPILLDgeKDKVIGFKRALTYFiypegRRSSKDDIKTNWIMHEYR 139
                        *******98666777*********99995545566677*********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.26E-235156IPR003441NAC domain
PROSITE profilePS5100526.1328159IPR003441NAC domain
PfamPF023652.1E-119139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MEHQFADMPL GYRFRPRDIQ ICEFVAKKNI DPNYSSYPLC DGCNVYGAEP WVLPVVGAEA  60
NMGKGLGEHQ YYFDMSKYRS RKAGRGRWLA NTKDIPILLD GEKDKVIGFK RALTYFIYPE  120
GRRSSKDDIK TNWIMHEYRQ YKCLENNKTQ WTLCKIGETG TTSPRAKDVR YEEHHHQQQQ  180
QYNLLGSIAA SANEHTEMEV EVQVPPLLQH CHDHEIMDSE DQRQPAAFLV SFEESQQTSP  240
QDWDAPTMDE LFNELAQQTG MHGEDQGQPA GFPYFDEY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-12715616162NO APICAL MERISTEM PROTEIN
1ut4_B3e-12715616162NO APICAL MERISTEM PROTEIN
1ut7_A3e-12715616162NO APICAL MERISTEM PROTEIN
1ut7_B3e-12715616162NO APICAL MERISTEM PROTEIN
3swm_A3e-12715619165NAC domain-containing protein 19
3swm_B3e-12715619165NAC domain-containing protein 19
3swm_C3e-12715619165NAC domain-containing protein 19
3swm_D3e-12715619165NAC domain-containing protein 19
3swp_A3e-12715619165NAC domain-containing protein 19
3swp_B3e-12715619165NAC domain-containing protein 19
3swp_C3e-12715619165NAC domain-containing protein 19
3swp_D3e-12715619165NAC domain-containing protein 19
4dul_A3e-12715616162NAC domain-containing protein 19
4dul_B3e-12715616162NAC domain-containing protein 19
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5F0N70.0A0A2G5F0N7_AQUCA; Uncharacterized protein
STRINGAquca_003_00817.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.11e-15NAC family protein