PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G308700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 274aa    MW: 31667.2 Da    PI: 4.9705
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G308700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.52.7e-1911321127
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvka.eekewyfFskrdkkyatgkrknratksgyWkat 86 
                        +p G+rF+P+d ++  e+ +kk  + + +     + +++y +ePw Lp      ++ +   ++ y+F  +  ky     ++r++ +g+W a 
  Aqcoe2G308700.1.p   1 MPLGYRFRPRDIQIC-EFVAKKNIDPNYSSYPLCDGCNVYGAEPWVLPVvgaeaNMGKgFGEHQYYFDMS--KY-----RSRKAGRGRWLAN 84 
                        699**********88.888888888887776889**************4344331111122244666554..33.....3566788****** PP

                NAM  87 gkdkevlsk..kgelvglkktLvfy.....kgrapkgektdWvmheyr 127
                         kd ++l    k++++g k+ L+++     + ++++  kt+W+mheyr
  Aqcoe2G308700.1.p  85 TKDIPILLDgeKDKVIGFKRALTYFiypegRRSSKDDIKTNWIMHEYR 132
                        *******98666777*********99995545566677*********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.62E-231149IPR003441NAC domain
PROSITE profilePS5100526.1321152IPR003441NAC domain
PfamPF023652.1E-112132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MPLGYRFRPR DIQICEFVAK KNIDPNYSSY PLCDGCNVYG AEPWVLPVVG AEANMGKGFG  60
EHQYYFDMSK YRSRKAGRGR WLANTKDIPI LLDGEKDKVI GFKRALTYFI YPEGRRSSKD  120
DIKTNWIMHE YRQYKCLENN KTQWTLCKIG ETGTTSPRAK DVRYEEQHHH QQQQQQYNLL  180
GSIAASANEH TEMEVEVQVP PLLQHCHDHE IMDSEDQRQP AAFLVSFEES QQTSPQDWDA  240
PTMDELFNEL AQQTGMDSED QGQPAGFPYF DEY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-13114917162NO APICAL MERISTEM PROTEIN
1ut4_B5e-13114917162NO APICAL MERISTEM PROTEIN
1ut7_A5e-13114917162NO APICAL MERISTEM PROTEIN
1ut7_B5e-13114917162NO APICAL MERISTEM PROTEIN
3swm_A6e-13114920165NAC domain-containing protein 19
3swm_B6e-13114920165NAC domain-containing protein 19
3swm_C6e-13114920165NAC domain-containing protein 19
3swm_D6e-13114920165NAC domain-containing protein 19
3swp_A6e-13114920165NAC domain-containing protein 19
3swp_B6e-13114920165NAC domain-containing protein 19
3swp_C6e-13114920165NAC domain-containing protein 19
3swp_D6e-13114920165NAC domain-containing protein 19
4dul_A5e-13114917162NAC domain-containing protein 19
4dul_B5e-13114917162NAC domain-containing protein 19
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5F0U20.0A0A2G5F0U2_AQUCA; Uncharacterized protein
STRINGAquca_003_00836.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08790.16e-16NAC family protein