PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G311100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 291aa    MW: 33194.4 Da    PI: 4.742
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G311100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.43.5e-10128175455
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h   +rrRR+ iN+ + +L+++lP++        +  +i+ +++eYIk+L+
  Aqcoe2G311100.1.p 128 SHLTDDRRRRNTINQFYTTLQSMLPNL----ISQETRTSIVSRTIEYIKQLE 175
                        677789********************9....34456678***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.42124174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.0E-8128175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-11128191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.03E-12128195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.0E-7130180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.66E-6134173No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MKEEEDSVSE YLFNIMKNYS DSVIPSFSQL SPHSQQHEEE EMKQDDVSLS QYLFNLINNY  60
STTIISTTSS ADSHLYPPQT NINKQVKEED EDNNKPHNYK PSFSFSLLDA CSSRKRSRST  120
SETLPLTSHL TDDRRRRNTI NQFYTTLQSM LPNLISQETR TSIVSRTIEY IKQLEELVEE  180
LETKKKEIER TTLMSTYTTQ ESNMDVIVSG EIVIFGIYLE IGRCLVSKVL MVFEDYRVEV  240
LAANVSVNGN VIKLMVTALI NGGKGRDLLI ELIKGEISRL VSTELTQSLF *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G09820.14e-06bHLH family protein