PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G312600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 322aa    MW: 35758.4 Da    PI: 4.2414
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G312600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM73.17.2e-23201532128
                NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleev.ikev.diykvePwdLpk....kvkaeek.ewyfFskrdkkyatgkrknratksgyW 83 
                        ppG++F+P+d++l+++yL++k+ +++   + + +v ++e+ +  +++P +Lp     +v+a+ +   yfF+kr        r++r++ +gyW
  Aqcoe2G312600.1.p  20 PPGCQFQPSDHQLIQNYLQPKAFSEStmeIIIPDVlVAEAkEFSDLDPFNLPGpsynTVTAGLSmYRYFFVKR--------RHERSAGNGYW 103
                        9********************9888854422223335555578999*****9544543333333255999987........5678899**** PP

                NAM  84 katgkdkevlskkgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
                        kat  d+++ + +g+ +g  ktL ++     + ++++  kt W+m e+rl
  Aqcoe2G312600.1.p 104 KATSGDTTIRDGQGRPIGYMKTLKYHiyaknRTSSSDDIKTPWIMREFRL 153
                        **************************8885545666667*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.37E-3010173IPR003441NAC domain
PROSITE profilePS5100529.82319176IPR003441NAC domain
PfamPF023652.4E-1720153IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MSRDTREEST SYVMDFSQIP PGCQFQPSDH QLIQNYLQPK AFSESTMEII IPDVLVAEAK  60
EFSDLDPFNL PGPSYNTVTA GLSMYRYFFV KRRHERSAGN GYWKATSGDT TIRDGQGRPI  120
GYMKTLKYHI YAKNRTSSSD DIKTPWIMRE FRLANGEGDK NTKDSAVWTL CKIGETGRCE  180
KDKACAVDSN TTWQQQVHEK QQTQTEATAS YGWVSEPATA SYGWVSEPAT ASYGWVSEPA  240
TASYDWVSDE PASPAPTTAL MLDATTSGPA VMPLDEPAWM SADDAAMTGQ QDEIYGDDDI  300
SVENAVNWIA DNCTDADYFL Y*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-131817314165Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5F0X30.0A0A2G5F0X3_AQUCA; Uncharacterized protein
STRINGAquca_003_00875.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.13e-19NAC family protein