PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G363100.2.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 381aa    MW: 43050.7 Da    PI: 10.5269
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G363100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.54.1e-31314371359
                        -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ ++p ++++tYegeHnh+
  Aqcoe2G363100.2.p 314 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLDEPAMLIVTYEGEHNHP 371
                        9************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105335.8E-18265310IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.802.7E-33300372IPR003657WRKY domain
PROSITE profilePS5081129.895307373IPR003657WRKY domain
SuperFamilySSF1182909.94E-27310371IPR003657WRKY domain
SMARTSM007741.1E-38312372IPR003657WRKY domain
PfamPF031063.5E-27314371IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MMEEVEEANK AAVESCNRVF NLLSKPLDQN GYRNLMGETG EAVVKFKKVV SLLSTGLGHA  60
RVRKQKKNLQ FQSPFPQNIF LDKPNPSTDA SHKPLQLLQN DFHKNQIVEV GLTAKNPEQF  120
TQRMFLESSA LDRGSVSKAS LTFSGQRPSA TPYQLFQQQQ QQQQQQQHQQ AQRFQLQLQQ  180
QQRQQQQQQQ QQQQQKMNFQ AEMMQRRSES GISLKFDSPS CTQTMSSSKS FMSSLSLDGS  240
VANMGGNSFH LIGAPQSSNS HQNHKRRCSG RGPDGSVKCG SSGRCHCSKR RKLRVKRSIK  300
VPAISNKIAD IPPDEYSWRK YGQKPIKGSP HPRGYYKCSS MRGCPARKHV ERCLDEPAML  360
IVTYEGEHNH PRMISQVTNT *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-19305370771WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid. {ECO:0000269|PubMed:11449049}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008235315.11e-155PREDICTED: probable WRKY transcription factor 21
SwissprotO043361e-110WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLA0A2G5CJQ50.0A0A2G5CJQ5_AQUCA; Uncharacterized protein
STRINGAquca_049_00056.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-77WRKY DNA-binding protein 21