PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G365700.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family B3
Protein Properties Length: 246aa    MW: 28624.2 Da    PI: 10.5323
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G365700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.43.3e-10113194175
                        EEEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT-- CS
                 B3   1 ffkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk 75 
                        f k+lt sdv  + +rl++  kfa+e        ++k  e++t +++d +g+++++k++ +  + ++ + + W +F+k+++L 
  Aqcoe2G365700.1.p 113 FRKILTESDVRDNqARLIIHAKFAKEAikpllrpNEKLSEGITAIMYDHRGKVYNMKYKQWTDKPHV-IFGDWLKFCKEHKLI 194
                        889*******98889*********999***999844555899****************777776555.555*********996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.109.1E-14110195IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019367.26E-14110195IPR015300DNA-binding pseudobarrel domain
CDDcd100172.27E-14111217No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MMNGRDGATS SAITVQLSEV RPAAAAQLFF FPQLKRLTNY KANNFNHNSL GLEEEKENNS  60
VQEEKQAANN LLHMRYTPVK DIKSFIKLGE SLGRLPPIKE LHGLIGQCTT RSFRKILTES  120
DVRDNQARLI IHAKFAKEAI KPLLRPNEKL SEGITAIMYD HRGKVYNMKY KQWTDKPHVI  180
FGDWLKFCKE HKLIALVHRI RLWAFRHSET DKLCFAITWE LRALKIIEYR PEKKIENNNK  240
RKRKN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5CKU90.0A0A2G5CKU9_AQUCA; Uncharacterized protein
STRINGAquca_049_00035.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03170.15e-17B3 family protein