PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G366500.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

NAC

Protein Properties

Length: 335aa MW: 37899 Da PI: 6.6875

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G366500.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	56.4	1e-17	11	122	13	128
NAM 13 elvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglk 103 +l+ +yL+kkv+g++++ e i e ++y k ePw + + e+ke+yfF+k ++ +g+rk+r++ g Wk g ++ +++ + + g++ Aqcoe2G366500.1.p 11 QLI-DYLQKKVNGEEVPS-ELIMEHNLYgKEEPWVIF--GEREDKELYFFTKLINRFVKGNRKSRTAGGGAWK--GDSTVIIEDYRGKLGVR 96 677.9********999.78888888835696..446889***********************9..6777888889999 PP NAM 104 ktLvfykg.rapkgektdWvmheyrl 128 +t++f + ++ ++ +W+mhey+l Aqcoe2G366500.1.p 97 RTFTFELNkDSTLKTEYRWTMHEYAL 122 *9541344445668****87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	21.037	1	142	IPR003441	NAC domain
Pfam	PF02365	8.9E-11	8	122	IPR003441	NAC domain
SuperFamily	SSF101941	3.53E-20	13	141	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence Send to blast
MKHKNQFTHV QLIDYLQKKV NGEEVPSELI MEHNLYGKEE PWVIFGERED KELYFFTKLI 60 NRFVKGNRKS RTAGGGAWKG DSTVIIEDYR GKLGVRRTFT FELNKDSTLK TEYRWTMHEY 120 ALISTDESTQ GDQDVLCRIR RTLISESSRK KSVKQEEEED VVPPPPPPPS ISIPEVVNGV 180 VVKSYATGKR TVKIKLKQEV QGVRSPPTTI LDSIPEQENG VVVALAADDH TPTAVAGLDL 240 TLPQEHDPHS SLPQENGAAA NGTLAMAVKN MDTKEEKKEL ILKQFTGQLM ENIHHYKEET 300 SLVPNSFFDI DTHRNWMTGC ELLLTKKNTK QNQL*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	6e-16	12	141	31	164	NO APICAL MERISTEM PROTEIN
1ut4_B	6e-16	12	141	31	164	NO APICAL MERISTEM PROTEIN
1ut7_A	6e-16	12	141	31	164	NO APICAL MERISTEM PROTEIN
1ut7_B	6e-16	12	141	31	164	NO APICAL MERISTEM PROTEIN
3swm_A	7e-16	12	141	34	167	NAC domain-containing protein 19
3swm_B	7e-16	12	141	34	167	NAC domain-containing protein 19
3swm_C	7e-16	12	141	34	167	NAC domain-containing protein 19
3swm_D	7e-16	12	141	34	167	NAC domain-containing protein 19
3swp_A	7e-16	12	141	34	167	NAC domain-containing protein 19
3swp_B	7e-16	12	141	34	167	NAC domain-containing protein 19
3swp_C	7e-16	12	141	34	167	NAC domain-containing protein 19
3swp_D	7e-16	12	141	34	167	NAC domain-containing protein 19
4dul_A	6e-16	12	141	31	164	NAC domain-containing protein 19
4dul_B	6e-16	12	141	31	164	NAC domain-containing protein 19

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15500.1	1e-17	NAC domain containing protein 3

Link Out ? help Back to Top
Phytozome	Aqcoe2G366500.1.p