PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G371800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 147aa    MW: 16063.6 Da    PI: 9.0224
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G371800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.78e-201566256
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                       +y+GVr ++ +g+++AeIrdp+ +  ++r++lg+f+t+eeAa a+++a+ +++g+
  Aqcoe2G371800.1.p 15 HYRGVRKRP-SGKFAAEIRDPTRR--SARVWLGTFDTPEEAAHAYDHAAYAMRGH 66
                       7********.7*********9543..5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.104.0E-311574IPR001471AP2/ERF domain
PfamPF008479.0E-151566IPR001471AP2/ERF domain
CDDcd000186.83E-171574No hitNo description
SMARTSM003801.4E-321579IPR001471AP2/ERF domain
PROSITE profilePS5103223.131573IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-221573IPR016177DNA-binding domain
PRINTSPR003673.0E-91627IPR001471AP2/ERF domain
PRINTSPR003673.0E-93955IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MRNSTGGPRE DRGVHYRGVR KRPSGKFAAE IRDPTRRSAR VWLGTFDTPE EAAHAYDHAA  60
YAMRGHLAIL NFPNIYTSGT ASQLAYSSSP SSSPSCSAAS NFISSSSSSS SVVATSRNST  120
EQQRQVIEFE YLDDRLLEEL LETGRK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-291613415112Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017412817.14e-41PREDICTED: ethylene-responsive transcription factor ERF098-like
SwissprotQ9LTC51e-37ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A2G5CYV91e-103A0A2G5CYV9_AQUCA; Uncharacterized protein
STRINGAquca_034_00377.11e-103(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.15e-24ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]