PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G397000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 364aa    MW: 40230.2 Da    PI: 6.4083
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G397000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.9e-20197247256
                AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                         y+GVr+++ +g+WvAeIr p++   r r++lg+f+taeeAa a++ a+ kl+ge
  Aqcoe2G397000.1.p 197 LYRGVRQRH-WGKWVAEIRLPRN---RSRVWLGTFDTAEEAAFAYDTAAYKLRGE 247
                        59******9.**********955...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.69E-32196256No hitNo description
SMARTSM003805.4E-36197260IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.7E-32197255IPR001471AP2/ERF domain
PROSITE profilePS5103223.38197254IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-23197255IPR016177DNA-binding domain
PfamPF008473.3E-13198247IPR001471AP2/ERF domain
PRINTSPR003674.7E-11198209IPR001471AP2/ERF domain
PRINTSPR003674.7E-11220236IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MLNDPILWGA LAHSSVCANE GTEFFSSPEP SSSVDDIATV SLNITEFGKR KSNLENGFAK  60
EFTSNVIVPE STSPVSSMSN TATSSETSEV KGNSIPVNFI DMFPTFSGSQ VNHSPPNIPN  120
LNLFLQVSEP SAEQDQVQSQ PGLDWHAINK SYMNCMSKSS AGYCLGVNKT QTMKYAGRKM  180
QENHQNSWSA SSSQGKLYRG VRQRHWGKWV AEIRLPRNRS RVWLGTFDTA EEAAFAYDTA  240
AYKLRGEFAQ LNFPDLKHQL KANSLNGSST AALLDSKLQA IAQKKKPPAP DKLIPKSQKM  300
EQLSEKPIRK ECSFDLESRV GSELMGESKK THEMVSDVDD VLLSRMPSLD MDMIWDSLPI  360
FDS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-22193264168ATERF1
3gcc_A5e-22193264168ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010241385.11e-104PREDICTED: ethylene-responsive transcription factor ERF062-like
TrEMBLA0A2G5CXQ20.0A0A2G5CXQ2_AQUCA; Uncharacterized protein
STRINGAquca_034_00155.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.18e-55ERF family protein