PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G415100.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 575aa MW: 63123 Da PI: 6.9591

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G415100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.9	1.8e-08	380	427	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq Aqcoe2G415100.1.p 380 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 427 8***********************9....677***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	6.94E-17	374	445	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	1.02E-9	374	431	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.4E-16	376	444	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.523	376	426	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.4E-5	380	427	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	2.6E-9	382	432	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence Send to blast
MEKEFFGNAN ATSPSPHLSY RPSISISSPQ DMEIQANDRL PNCFLNLNWE NSMDHGVHFD 60 SALSSFVSSP AASNSRGASE SVVIRELIGR LGSICNSNDI STQQSQTLNY MGEGNNSTNT 120 SCYSTPLNSP PKLNNLSMLD HQLPMPNHPG LAPFSTDPGF AERAARYSCF GTKSLGGLMG 180 QFGFNDLEMP QRSTRLVENG KLSRVSSSHS LKATGSLMNA QEQERLEEQM RSIPASVSDR 240 RFTNKLSRSS SPDNAEFNNA AFEKPLASES IQIEEANMKS VNDVNARKRK TAPKSKAKDI 300 TSLSSSSKDA KEATDDDKSN GKRSKSNDTN GNEKASAKAK GEPNSGDGAK KQNKDTPKPS 360 PEPPKDYIHV RARRGQATDS HSLAERVRRE KISERMKFLQ DLVPGCNKVT GKALMLDEII 420 NYVQSLQRQV EFLSMKLATV NPRLDFNMEA TLTKDLLQSR ESLSQAMYQL NSSVSAFHYG 480 HQGEGTPVQR EISNRTETQS SMNPLGPTLQ RNTSLELPPL DGFGEAAAHF ANFWEDDLQS 540 VVQMGFNQNQ SQESGFEIHS FQGSLSTANM KVEL*

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence Send to blast

MEKEFFGNAN ATSPSPHLSY RPSISISSPQ DMEIQANDRL PNCFLNLNWE NSMDHGVHFD  60
SALSSFVSSP AASNSRGASE SVVIRELIGR LGSICNSNDI STQQSQTLNY MGEGNNSTNT  120
SCYSTPLNSP PKLNNLSMLD HQLPMPNHPG LAPFSTDPGF AERAARYSCF GTKSLGGLMG  180
QFGFNDLEMP QRSTRLVENG KLSRVSSSHS LKATGSLMNA QEQERLEEQM RSIPASVSDR  240
RFTNKLSRSS SPDNAEFNNA AFEKPLASES IQIEEANMKS VNDVNARKRK TAPKSKAKDI  300
TSLSSSSKDA KEATDDDKSN GKRSKSNDTN GNEKASAKAK GEPNSGDGAK KQNKDTPKPS  360
PEPPKDYIHV RARRGQATDS HSLAERVRRE KISERMKFLQ DLVPGCNKVT GKALMLDEII  420
NYVQSLQRQV EFLSMKLATV NPRLDFNMEA TLTKDLLQSR ESLSQAMYQL NSSVSAFHYG  480
HQGEGTPVQR EISNRTETQS SMNPLGPTLQ RNTSLELPPL DGFGEAAAHF ANFWEDDLQS  540
VVQMGFNQNQ SQESGFEIHS FQGSLSTANM KVEL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010243164.1	0.0	PREDICTED: transcription factor bHLH62-like
TrEMBL	A0A2G5CX33	0.0	A0A2G5CX33_AQUCA; Uncharacterized protein
STRING	Aquca_034_00013.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	1e-71	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe2G415100.1.p