PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G419900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family WRKY
Protein Properties Length: 826aa    MW: 89000.2 Da    PI: 6.1912
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G419900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1031.6e-32350406259
                        --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkk+ers+ d++++ei+Y+g Hnh+
  Aqcoe2G419900.1.p 350 EDGYNWRKYGQKQVKGSEYPRSYYKCTHQNCQVKKKIERSH-DGQITEIIYKGGHNHP 406
                        7****************************************.***************8 PP
2WRKY103.51.1e-32567625159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k+v++tYeg+Hnhe
  Aqcoe2G419900.1.p 567 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHDLKYVITTYEGKHNHE 625
                        59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-28343408IPR003657WRKY domain
SuperFamilySSF1182908.76E-26346408IPR003657WRKY domain
SMARTSM007744.0E-36349407IPR003657WRKY domain
PfamPF031061.1E-24350406IPR003657WRKY domain
PROSITE profilePS5081124.134350408IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.4E-36552627IPR003657WRKY domain
SuperFamilySSF1182903.66E-28560627IPR003657WRKY domain
PROSITE profilePS5081138.09562627IPR003657WRKY domain
SMARTSM007742.3E-37567626IPR003657WRKY domain
PfamPF031066.0E-25568625IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009942Biological Processlongitudinal axis specification
GO:0030010Biological Processestablishment of cell polarity
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 826 aa     Download sequence    Send to blast
MAETAEEDGG GGGTIGDWRA LISSPRGGGN GSSLFSGFLA DGFASSRSFS HILNGSDIAN  60
SSLDCIKLED FAKKGDEGVG GGGGSHCNEG VGLDVIMEAS SNWKPPPGRN GGTSIAERRA  120
ARCGFNAPRL NTARFRTTSP LSSPSVRSPY LTIPPGLSPT SLLDSPVMLP NSQAQPSPTT  180
GTFPFPSQSL EIAMPILATS NVEKDKDDVV DSSFMFKPHG DPISFQYHPG TENQVSSASN  240
QTQNVDVADA SHRSPAPVQA QVDIECQAGL LKQTMAKNYA SGSPSTVEGA TNMVVDSNYL  300
PLRTSDTGAA SEQAPQLEEQ VHVDDTGSQH VVEGDQRGAY PPTVTGRPSE DGYNWRKYGQ  360
KQVKGSEYPR SYYKCTHQNC QVKKKIERSH DGQITEIIYK GGHNHPMPQP SRRSVLASTY  420
ALSEMLETGE DAGSYVKVEG GSAWRSIPQG SRDNKVASDW RGDGLERTSS TSVVTEVSDP  480
LSTAQGKQLG MVESADTPEL SSTLASHDEE EDRATQGSIS LGDDADDDES ESKRRRKDSS  540
LIEANMASRA VREPRVVVQT DSEVDILDDG YRWRKYGQKV VKGNPNPRSY YKCTSAGCSV  600
RKHVERASHD LKYVITTYEG KHNHEVPAAR SSSHMNSNSG NVAAANTQSS LTLPRGTNIP  660
KPETQVHDLV PRFERKPDFS NEFIRSTNIG GFATDMKFVP STCYDMKLPP FQTSMSSFGL  720
NATHNGTHQA SHITQVLPDF PISLPMNVPL SANLALSGFG CNNLGKVVGS QSFISGQQTK  780
DGEMRFLRPK QEQKDDAVFE SHLPGNHLPN ASSSVYRQMM GGYPM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-34350628878Probable WRKY transcription factor 4
2lex_A1e-34350628878Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00071PBMTransfer from AT5G56270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010268324.10.0PREDICTED: WRKY transcription factor SUSIBA2-like isoform X1
TrEMBLA0A2G5CF680.0A0A2G5CF68_AQUCA; Uncharacterized protein
STRINGAquca_058_00185.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.17e-97WRKY DNA-binding protein 2