PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G425900.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 149aa    MW: 16628.2 Da    PI: 9.8425
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G425900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.20.0003569873654
                       S-STCHHHHHHHHHHHHHH CS
                HLH 36 kKlsKaeiLekAveYIksL 54
                       +K + a++L +A+eYIk L
  Aqcoe2G425900.1.p 69 GKTDTASVLFEAMEYIKFL 87
                       899**************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.59E-103699IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.6E-63796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.363887IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MQRLNLHSEG REGAKMTEHK RRPASLEPVS LSCGTRKRYK TEVPISRKEK KEIMGERVAT  60
LQHLVSPFGK TDTASVLFEA MEYIKFLHDQ VKVLSAPYLP SASTREMQES ALFDLRNHGL  120
CLVPISCTLR VARANDADIW ASMKGSAL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004309594.14e-55PREDICTED: transcription factor bHLH113
SwissprotQ7XJU27e-42BH153_ARATH; Transcription factor bHLH153
TrEMBLA0A2G5CEF99e-87A0A2G5CEF9_AQUCA; Uncharacterized protein
STRINGAquca_058_00045.12e-87(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.53e-44bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]