PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G430200.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

FAR1

Protein Properties

Length: 294aa MW: 33441.3 Da PI: 4.8877

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G430200.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	89.1	6e-28	118	206	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +Y++YAk++GF +r+ + ++s r+++i++r+f C+keg+r +++k+ ++++r++r++tr gC+a+++v++ek+gkw+++kle+eH H+l Aqcoe2G430200.1.p 118 YYDAYAKRIGFVIRVGNCHRSGRDNSIISRRFLCNKEGFRLPNNKTkRNENRKPRETTREGCNAMIMVRREKSGKWVISKLETEHCHPL 206 8*************************************9998875788999********************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.0E-27	118	206	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence Send to blast
MNFTAYVNAD DAMIEDSVRI GIETDIDDRR IDSSFEGEAH GPEDGIIATI SDEKEFIELG 60 PEDGALTIIS NERELPAHEP EEGQMTTVSD EKESTAHDGS EDPYIGMQFE SEQAAMIYYD 120 AYAKRIGFVI RVGNCHRSGR DNSIISRRFL CNKEGFRLPN NKTKRNENRK PRETTREGCN 180 AMIMVRREKS GKWVISKLET EHCHPLGLPA SKGRRGSVQA RPQDEKDKKI RELTLELHRA 240 NLRLAECREQ LDMILNDAER HTDHLSKTVQ DIVENVKEIE AEDQDKPSYH LIM*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010268172.1	1e-119	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2G5CES5	0.0	A0A2G5CES5_AQUCA; Uncharacterized protein
STRING	Aquca_058_00091.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	1e-55	FAR1 family protein

Link Out ? help Back to Top
Phytozome	Aqcoe2G430200.1.p