PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G433200.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bZIP

Protein Properties

Length: 496aa MW: 53078.4 Da PI: 6.1926

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G433200.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.8	7.1e-11	255	313	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK+ +i eLe+kv++L++e ++L +l+ l+ + l+ e+ Aqcoe2G433200.1.p 255 KRAKRIWANRQSAARSKERKLRYISELERKVQTLQTEATTLNTQLNVLQRDTSGLTVEN 313 9*********************************************9998888777766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.9E-16	251	315	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.749	253	316	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.4E-10	255	309	No hit	No description
Pfam	PF00170	2.6E-9	255	309	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.74E-11	255	306	No hit	No description
CDD	cd14703	3.48E-22	256	305	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence Send to blast
MDFDKPSFSS SSSSQHLHGG GVGGGGGLAP SPPLPPLSST TTRYFSSLGE SMAATATLES 60 GNNLINIENY TSDGNGNGNG NGIGNGNGNG NRFSYDISRM SDLPTKGLFG HRRAHSEILS 120 LPDDISFDSD LGVVGSGSAA NADGPSFSDE TEEDLFSMFM DMEKFGSGST ATSSGEPSSS 180 VPPPPPLGSG VQMDNSIMGF TDKPRIRHHH SQSMDGSTSI KSELLISGSD GPSFTENKKA 240 ISSSKLADLA LVDPKRAKRI WANRQSAARS KERKLRYISE LERKVQTLQT EATTLNTQLN 300 VLQRDTSGLT VENNELKLRL STVEQQVNLQ DALNNALRDE LQRLKVATGQ AITGVGSLMN 360 FGSTHRSSQP FYPNNQTMHG VLAAHQFQQL QIQSQQSLQL QQQQQQQLQQ QQTGDMKLKA 420 SLSSASRRDN SYDNNPSQRS GNSQPFSCPP ISAAPDSLST VPPVSTAAAT TSPAPSWGLE 480 TQRFSSLSEM QREFI*

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence Send to blast

MDFDKPSFSS SSSSQHLHGG GVGGGGGLAP SPPLPPLSST TTRYFSSLGE SMAATATLES  60
GNNLINIENY TSDGNGNGNG NGIGNGNGNG NRFSYDISRM SDLPTKGLFG HRRAHSEILS  120
LPDDISFDSD LGVVGSGSAA NADGPSFSDE TEEDLFSMFM DMEKFGSGST ATSSGEPSSS  180
VPPPPPLGSG VQMDNSIMGF TDKPRIRHHH SQSMDGSTSI KSELLISGSD GPSFTENKKA  240
ISSSKLADLA LVDPKRAKRI WANRQSAARS KERKLRYISE LERKVQTLQT EATTLNTQLN  300
VLQRDTSGLT VENNELKLRL STVEQQVNLQ DALNNALRDE LQRLKVATGQ AITGVGSLMN  360
FGSTHRSSQP FYPNNQTMHG VLAAHQFQQL QIQSQQSLQL QQQQQQQLQQ QQTGDMKLKA  420
SLSSASRRDN SYDNNPSQRS GNSQPFSCPP ISAAPDSLST VPPVSTAAAT TSPAPSWGLE  480
TQRFSSLSEM QREFI*

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor with an activatory role.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00126	DAP	Transfer from AT1G06070	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC253894	0.0	AC253894.1 Aquilegia coerulea clone COL02-M12, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010268265.1	1e-136	PREDICTED: probable transcription factor PosF21
Refseq	XP_010268266.1	1e-136	PREDICTED: probable transcription factor PosF21
Refseq	XP_010268267.1	1e-136	PREDICTED: probable transcription factor PosF21
Swissprot	Q04088	1e-123	POF21_ARATH; Probable transcription factor PosF21
TrEMBL	A0A2G5CEK1	0.0	A0A2G5CEK1_AQUCA; Uncharacterized protein
STRING	Aquca_058_00063.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-121	bZIP family protein

Link Out ? help Back to Top
Phytozome	Aqcoe2G433200.1.p

Publications ? help Back to Top
Duarte JM, et al. Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. Mol. Biol. Evol., 2006. 23(2): p. 469-78 [PMID:16280546] Xu C, et al. Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration. Nat Plants, 2018. 4(2): p. 108-115 [PMID:29358751]