PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G434200.6.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

FAR1

Protein Properties

Length: 254aa MW: 29573.9 Da PI: 6.3851

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G434200.6.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.6	1.1e-24	72	159	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 ++Y++Y+++ GF++r++++++s+ ++e++ ++vCskeg+r+++++ e+ + ++tr+gCka l++ ++ +kw+vt++ eHnHel+ Aqcoe2G434200.6.p 72 EYYDAYGRRNGFTIRVNRKRRSRVDREVIGFDYVCSKEGFRRKRQRV---EKARAKQTRVGCKAILVIAYRRdMEKWVVTNFLREHNHELM 159 69***************************************9988...8888999********99989*************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.9E-21	72	159	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence Send to blast
MANTSGLEFE SMDSDRDVDD GSSNEFDTVE ECDDTSGNEK TAGLPTEGLA VTVIHSEPYV 60 GMEFKSADDA REYYDAYGRR NGFTIRVNRK RRSRVDREVI GFDYVCSKEG FRRKRQRVEK 120 ARAKQTRVGC KAILVIAYRR DMEKWVVTNF LREHNHELMV PSEVPVRSDK GQLNEDEKDR 180 RIRELTTKLY NERQRFQRQC AAYEERCAAY KIQISKILKD IEVHNDHLTT KVDNVVQSIK 240 ELEEEDSQRR KDT*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC253894	0.0	AC253894.1 Aquilegia coerulea clone COL02-M12, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026420593.1	1e-121	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A2G5CEF7	0.0	A0A2G5CEF7_AQUCA; Uncharacterized protein
STRING	Aquca_058_00053.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	8e-33	FAR1 family protein

Link Out ? help Back to Top
Phytozome	Aqcoe2G434200.6.p