PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G434600.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

FAR1

Protein Properties

Length: 207aa MW: 23683.9 Da PI: 7.5042

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G434600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.7	4.5e-24	47	135	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA+++GF +r+ + ++s+ +g+i +r++ C+keg+ + + k + r++r+++r gCka++ +k ek+gkw v k + +HnH+l+ Aqcoe2G434600.1.p 47 FYDEYARRLGFVMRVMSCRRSEVDGRILSRRLGCNKEGHCVSIRGKFGTVRKPRTSNREGCKAMILIKIEKSGKWIVRKYVRDHNHPLV 135 9************************************999999989*************************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.8E-22	47	135	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence Send to blast
MNSETFVDEG SGMESSIVAE FGGSEGDALI EPYEGLEFDS EDHAKAFYDE YARRLGFVMR 60 VMSCRRSEVD GRILSRRLGC NKEGHCVSIR GKFGTVRKPR TSNREGCKAM ILIKIEKSGK 120 WIVRKYVRDH NHPLVVSSRE SRHTMDEKDK QIQELTAELR RKKRLCATYR EQMLAFIKDV 180 EEHGDQLSTK VQLVVNSMRE VESEES*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	158	164	LRRKKRL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010268159.1	1e-112	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like isoform X1
TrEMBL	A0A2G5CEF8	1e-150	A0A2G5CEF8_AQUCA; Uncharacterized protein
STRING	Aquca_058_00049.1	1e-150	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	8e-96	FAR1 family protein

Link Out ? help Back to Top
Phytozome	Aqcoe2G434600.1.p