PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe2G435000.4.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

bHLH

Protein Properties

Length: 135aa MW: 15028.4 Da PI: 9.2568

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe2G435000.4.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.8	0.00022	45	73	21	54
HHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 21 eeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++L++l+ + K + a++L +A+eYIk L Aqcoe2G435000.4.p 45 ATLQQLVSPF-----DKTDTASVLFEAMEYIKFL 73 5677777774.....59***************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	4.9E-7	23	83	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	2.62E-10	23	85	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	10.391	24	73	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 135 aa Download sequence Send to blast
MTEHKRRPAS LEPAVSLSCG TRQRYKTEVP ISRKEKKEIM GERVATLQQL VSPFDKTDTA 60 SVLFEAMEYI KFLHDQVKVL SAPYLLSAST REMQESALFD LRNHGLCLVP ISCTLRVTRA 120 NGADIWASMK GSAL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026432063.1	1e-54	transcription factor bHLH153-like
Swissprot	Q7XJU2	4e-40	BH153_ARATH; Transcription factor bHLH153
TrEMBL	A0A2G5CEF9	4e-95	A0A2G5CEF9_AQUCA; Uncharacterized protein
STRING	Aquca_058_00045.1	6e-96	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05710.5	2e-42	bHLH family protein

Link Out ? help Back to Top
Phytozome	Aqcoe2G435000.4.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444]