PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G040500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 333aa    MW: 37272.5 Da    PI: 5.7535
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G040500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.71.4e-18115164154
                AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                        s+ykGVr+++ +g+W+AeIrdp    +r  r++lg+f+tae A +a+ +a kkle
  Aqcoe3G040500.1.p 115 SKYKGVRQRR-WGKWAAEIRDP----IRgVRVWLGTFDTAELASEAYQKALKKLE 164
                        89*****998.**********7....246************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.1E-11115164IPR001471AP2/ERF domain
SuperFamilySSF541713.6E-16115167IPR016177DNA-binding domain
CDDcd000186.27E-24115163No hitNo description
PROSITE profilePS5103219.585116173IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-22116172IPR001471AP2/ERF domain
SMARTSM003807.2E-25116179IPR001471AP2/ERF domain
PRINTSPR003671.7E-9117128IPR001471AP2/ERF domain
PRINTSPR003671.7E-9139155IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MPGPQRQLLN QDKMFKQTKK KSLTELGVMK IKTTKKVRKV RVICNDPDAT DSSSDEDEKS  60
EKSERRGKRL VREFHFPVVS AETERSYQGS NYGGSKPIIR SRNTTTANKN SRPSSKYKGV  120
RQRRWGKWAA EIRDPIRGVR VWLGTFDTAE LASEAYQKAL KKLELEMEKI GFQPRCSNKA  180
KSSLSATGSV SHSSICEDNE SHFSHSSPSS VLDVSTSTSV ISGLNNSSKL EDIINSTKAV  240
EPTQHQETTT DFVDQMATST TEQDMDIGFE LDSFLMNDFG QVFDDDFRGF DDIPSFEGLE  300
KDCNIDDILN LNFSLGADEL SWIDEHLNVA CP*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010265156.14e-79PREDICTED: ethylene-responsive transcription factor ERF118
RefseqXP_010265157.14e-79PREDICTED: ethylene-responsive transcription factor ERF118
TrEMBLA0A2G5D8820.0A0A2G5D882_AQUCA; Uncharacterized protein
STRINGAquca_026_00280.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.13e-19ERF family protein