PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G043800.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family GeBP
Protein Properties Length: 206aa    MW: 23723.1 Da    PI: 10.4031
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G043800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573119.61.7e-3772171297
             DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkif 89 
                        lfqrlw++eDei lLqG++++++++g      +++di  fy+++k++++++++k+qlveK+rrLKkKf++ +++++sgk+++f+++hdq +f
  Aqcoe3G043800.1.p  72 LFQRLWTDEDEIGLLQGFLEYTSQRGGfknsAYHHDIAPFYDQIKSKLQLDFNKNQLVEKLRRLKKKFRNVMSRINSGKDFNFKTPHDQATF 163
                        79***********************9777756677********************************************************* PP

             DUF573  90 elskkiWg 97 
                        e+s+kiW 
  Aqcoe3G043800.1.p 164 EISRKIWS 171
                        *******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.6E-3573171IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MDRNYLNVTG PNRTKYNRSG FDHKRQRITM STTTTTTTST IPIIPTTVSV PISTPIHEEE  60
KKPLAFDDSR RLFQRLWTDE DEIGLLQGFL EYTSQRGGFK NSAYHHDIAP FYDQIKSKLQ  120
LDFNKNQLVE KLRRLKKKFR NVMSRINSGK DFNFKTPHDQ ATFEISRKIW SGIAAETGWS  180
LSLNLLCLCL CLRSEKATRR TMGVA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010241430.13e-66PREDICTED: probable transcription factor At3g04930
SwissprotQ9CAV72e-50STKLJ_ARATH; Probable transcription factor At3g04930
TrEMBLA0A2G5D8221e-152A0A2G5D822_AQUCA; Uncharacterized protein
STRINGAquca_026_00251.11e-153(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.25e-51DNA-binding storekeeper protein-related transcriptional regulator