PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe3G045700.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

G2-like

Protein Properties

Length: 354aa MW: 39899.2 Da PI: 6.2962

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe3G045700.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	53.1	7.2e-17	200	231	25	56
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRla 56 AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Aqcoe3G045700.1.p 200 TTATPKQIRELMKVDGLTNDEVKSHLQKYRLH 231 68****************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	7.08E-7	200	234	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	1.0E-14	200	234	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.9E-14	201	231	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence Send to blast
MVMMMDYMET IKITNNKNKA YQDYMQALLE ERRKIQVFHR ELPLCLDLVN QAIENCKQYV 60 YSSERSDQCE EKQEETSSEG PVLEEFIPMK RSLSCEEEEE DKSNIDESNV NNNNNIGKKV 120 DWLRSVQLWN QNPEVPPPSQ QQEYHQQQEQ ENSPRKEISA DVKENGGAFH PFHKTKPIKT 180 VASETVTINT VPNSVQTAST TATPKQIREL MKVDGLTNDE VKSHLQKYRL HTRRPGPSMH 240 GNGNTPPTQF VVVGGIWVPP QDYTPSTTNA NAPSADSEKI YVPVAATSQL TLSLRQQQQQ 300 QKHHKQSELS TGSSHSERKS SLAEHSTREK NARSSSPAVT SSSTETTTAS PNF*

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence Send to blast

MVMMMDYMET IKITNNKNKA YQDYMQALLE ERRKIQVFHR ELPLCLDLVN QAIENCKQYV  60
YSSERSDQCE EKQEETSSEG PVLEEFIPMK RSLSCEEEEE DKSNIDESNV NNNNNIGKKV  120
DWLRSVQLWN QNPEVPPPSQ QQEYHQQQEQ ENSPRKEISA DVKENGGAFH PFHKTKPIKT  180
VASETVTINT VPNSVQTAST TATPKQIREL MKVDGLTNDE VKSHLQKYRL HTRRPGPSMH  240
GNGNTPPTQF VVVGGIWVPP QDYTPSTTNA NAPSADSEKI YVPVAATSQL TLSLRQQQQQ  300
QKHHKQSELS TGSSHSERKS SLAEHSTREK NARSSSPAVT SSSTETTTAS PNF*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_003631224.1	2e-76	PREDICTED: myb family transcription factor EFM
TrEMBL	A0A2G5D8U8	0.0	A0A2G5D8U8_AQUCA; Uncharacterized protein
STRING	Aquca_026_00236.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	1e-54	G2-like family protein

Link Out ? help Back to Top
Phytozome	Aqcoe3G045700.1.p