PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G052000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family ERF
Protein Properties Length: 203aa    MW: 22792.3 Da    PI: 8.3177
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G052000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.78.9e-164593254
                AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                       ++ GVr+++ +grWvAeI+d s   ++ r++lg+++ aeeAa a+++a+  l+
  Aqcoe3G052000.1.p 45 KFLGVRQRP-SGRWVAEIKDSS---QKLRVWLGTYDRAEEAAMAYDNAAWLLR 93
                       688******.7*********42...36********************995555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003805.0E-3345108IPR001471AP2/ERF domain
PROSITE profilePS5103219.87545102IPR001471AP2/ERF domain
SuperFamilySSF541715.17E-2045104IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.3E-2845102IPR001471AP2/ERF domain
CDDcd000188.55E-3145104No hitNo description
PRINTSPR003675.5E-74657IPR001471AP2/ERF domain
PfamPF008471.9E-104689IPR001471AP2/ERF domain
PRINTSPR003675.5E-76884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MDCTENTKVS SQAQCLCEDH DSISTTSKLH GKISNTDIIT NAKRKFLGVR QRPSGRWVAE  60
IKDSSQKLRV WLGTYDRAEE AAMAYDNAAW LLRGKNAKTN FPYNEIMKTH EGYCNLVGKN  120
PRFHQLFRHA ITKKNNYNKS LTSATYAERV RSGNCDKGGD RSSSDSVEFN SCVEETILCS  180
SSSGCCGLQE RDEQYWNQPG QQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-1644102160ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
5wx9_A1e-15451071477Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028106804.16e-57ethylene-responsive transcription factor ERN1-like
TrEMBLA0A2G5D8K61e-144A0A2G5D8K6_AQUCA; Uncharacterized protein
STRINGAquca_026_00181.11e-145(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.13e-18related to AP2 11