PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G068100.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 354aa    MW: 38791.7 Da    PI: 5.1617
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G068100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH512.6e-165199254
                       HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                       r +h+e E+rRR++iN++f+ Lr+llP++    ++K +Ka+ L +++eY++ L
  Aqcoe3G068100.1.p 51 RSKHSETEQRRRSKINERFQILRDLLPPS----DQKRDKASFLLEVIEYVQFL 99
                       899*************************9....9****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.3E-2148111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.0664999IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.19E-1750111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.55E-1551104No hitNo description
PfamPF000108.6E-145199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.3E-1255105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MEIMDPTRDL QEDGEDDEEE FMRKDGSSQK GSGGSRGDGK NSGDGKANMP RSKHSETEQR  60
RRSKINERFQ ILRDLLPPSD QKRDKASFLL EVIEYVQFLH EKLHKYESQH GNQEPSKLAP  120
WRYSYWTSEG MVENSRLVKN GSGPGLMFAG KVNENNVSIM PTMPANAQNL IEADHGLGVA  180
FKTVELQQGD ANKEVPLPTP MQPNPFTPVG SNDGMVQPIQ RPISDEENIT SQPPTIWQNQ  240
PWTTDCPTSE TSNEPEVLTM EGGTISIASV YSQGLLNNLT QALQSSGVDL SHASISVQVD  300
LGKRAIGRST TATSSAKDHA NPSTTKQART HSRGGSSGED TDETQKRQKA QGN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261235.21e-118PREDICTED: transcription factor BIM1 isoform X3
TrEMBLA0A2G5EPE80.0A0A2G5EPE8_AQUCA; Uncharacterized protein
STRINGAquca_006_00387.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.11e-65BES1-interacting Myc-like protein 2