PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G081500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family TCP
Protein Properties Length: 396aa    MW: 42727.9 Da    PI: 6.9091
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G081500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP125.36.5e-39622232116
                TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.... 88 
                        ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s++    
  Aqcoe3G081500.1.p  62 TPKRTSTKDRHTKVDGRGRRIRMPATCAARVFQLTKELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSAPsqlr 153
                        689******************************************************************99986777777777555556666 PP

                TCP  89 ..............................kaaksaakskksqksaasalnlakesr............a 116
                                                      ++++s+++ ++ ++  +++l+ ++es+            +
  Aqcoe3G081500.1.p 154 stffnpnlrrsewerniidesqhrilyssdNNNPSSMPFNFHSNTLNNMLQTKQESSatepscldmldsS 223
                        7788888888888888887777777776663333333333333333333333333333333333333331 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.9E-4266244IPR005333Transcription factor, TCP
PROSITE profilePS5136927.00168122IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0010229Biological Processinflorescence development
GO:0010252Biological Processauxin homeostasis
GO:0031540Biological Processregulation of anthocyanin biosynthetic process
GO:0042023Biological ProcessDNA endoreduplication
GO:0048467Biological Processgynoecium development
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MEGDNGMRRP NFPLQLLEKK EDDICSSSSG YPSLGISSER AETSTIHSDT SLQKAEEVKK  60
VTPKRTSTKD RHTKVDGRGR RIRMPATCAA RVFQLTKELG HKSDGETIEW LLQQAEPAVI  120
AATGTGTIPA NFTSLNISLR SSGSSMSAPS QLRSTFFNPN LRRSEWERNI IDESQHRILY  180
SSDNNNPSSM PFNFHSNTLN NMLQTKQESS ATEPSCLDML DSSEASTIGR KRRHEQEQET  240
SAQQHQIGNY LVQSSSSSIP ASHNTQLPAT FWMVNPNHNN QGGGVMSGDP IWTFPSVTNP  300
NMYRGSMSSG LHFMNFPTPM ALLSSQQLGV GGIGGGNGGG GGTNEGHLGM LAALNAYRPF  360
PGAGAGSSDD HEPQASGSHS HHGGNEGHDT NNHHS*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00224DAPTransfer from AT1G69690Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010258392.11e-162PREDICTED: transcription factor TCP14
TrEMBLA0A2G5EPD40.0A0A2G5EPD4_AQUCA; Uncharacterized protein
STRINGAquca_006_00276.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47620.12e-54TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14