PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G122900.3.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 344aa    MW: 38898.3 Da    PI: 5.5819
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G122900.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.42.2e-07145187855
                        HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         Er+RR+++++++ +Lr+l+P       ++++  ++L  A  YI +Lq
  Aqcoe3G122900.3.p 145 TERNRRKKLKTKILTLRSLVPDI-----TRMDIQATLGDAKSYIEKLQ 187
                        6*********************7.....69***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.15E-13136201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.12E-8136191No hitNo description
PROSITE profilePS5088812.957137186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-11139206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-7143192IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-4145187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MIKLIMVECN ISLEKEGIIA FMGDNLKEQK LEGSIYNARL TEEGNQFFQS TMSDHSWLEG  60
SSTSSVCLVE PLPVDSSPGF RREQVAGLDR SPGLAHPELL VESLIPTQPE YNHKIRPKKN  120
IVKEKDLNDL RRREGESRKS RNLFTERNRR KKLKTKILTL RSLVPDITRM DIQATLGDAK  180
SYIEKLQTEV KALQDELKDL EDEANKNAEL KDQTVADKGK TEDYVTSHFS ASDISTDQSK  240
YNQDSLPAYD LAQQMEEKVE VSECGENTFA LKLIFERRRG WFLMLMEAMQ ALGLNITEAN  300
AISVKGRVMN IFKAEAKSDG VQTEQLKDSL LKLLHNGLLM DKA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130151RRREGESRKSRNLFTERNRRKK
2130153RRREGESRKSRNLFTERNRRKKLK
3140149RNLFTERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DAP50.0A0A2G5DAP5_AQUCA; Uncharacterized protein
STRINGAquca_025_00344.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16910.12e-20bHLH family protein