PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G130600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 378aa    MW: 42921.9 Da    PI: 6.1938
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G130600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.31.5e-1971422128
                NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev...diykvePwdLpkkvkaeekewyfFskrdkkyat..gkrknratksgyWkatgk 88 
                        ppGfrF P+d++l+++yL++k++g++l+   vi+e    + +  +P+ L      +e+ +yfF++ +kk ++  +++ +r+ ++g+Wk +g+
  Aqcoe3G130600.1.p   7 PPGFRFCPSDQQLLKFYLRRKLTGEPLPG--VIPEKvfyGENAEKPSLLF-D-GRSEEYLYFFTEVSKKFSNsdSNKMERTNRDGTWKIQGN 94 
                        9*************************988..6666512344455677774.2.2345567*****999988633568889999********* PP

                NAM  89 dkevlsk...kgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
                        ++ + +    +++++g  + L f      +++  k +  + +mhe++l
  Aqcoe3G130600.1.p  95 HQVIDDVppnNKTVIGYNRHLKFVfkdqkEKKYYKDKDISFIMHEFTL 142
                        99888778888889******99997665434555566889******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.89E-234167IPR003441NAC domain
PROSITE profilePS5100527.6276167IPR003441NAC domain
PfamPF023655.2E-167142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
MMKKRIPPGF RFCPSDQQLL KFYLRRKLTG EPLPGVIPEK VFYGENAEKP SLLFDGRSEE  60
YLYFFTEVSK KFSNSDSNKM ERTNRDGTWK IQGNHQVIDD VPPNNKTVIG YNRHLKFVFK  120
DQKEKKYYKD KDISFIMHEF TLKNPPLSQH HQPDQASEWT VCSIRKKLGS DKKKNIDHQP  180
AAAAASYVSC SMPKQITGRK RSRASSNELM SSQSTTPPTT LSSKTSDMRS SLPVMMMPPH  240
DQQEKRQKHY HPFAESSQQA YNYCYNNESQ QTASISNQSA DTYAPDMATS SMIPAEAVLS  300
LPNEYSQSSQ TDYASPSNGY YVADQQQGAE VMDDFSIDIE DLYKELDSDL SPGEDGIGVY  360
PLTEQAGEDL LNELEHF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197203GRKRSRA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5CGE50.0A0A2G5CGE5_AQUCA; Uncharacterized protein
STRINGAquca_056_00045.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.15e-15NAC domain containing protein 41