PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G136600.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 397aa    MW: 45270.9 Da    PI: 8.9013
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G136600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM71.62e-22191521128
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkya..tgkrknratksgyWkatgkd 89 
                        lppGfrF+Pt++elv++yL+kkv++++l+  +vike  +y  e ++  + +++ +e+ +yfF++ +kk    +g++  r+  +g+Wk + + 
  Aqcoe3G136600.1.p  19 LPPGFRFNPTNQELVKYYLTKKVAEEPLPKLNVIKERTLYGKEAEEPSQFFAGkSEEFLYFFTQVNKKFVntNGNKMDRISGKGTWKMQNS- 109
                        79*************************9999********98865555433333044556****999986533799************8866. PP

                NAM  90 kevlskkgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
                         +v++ +++l+g  kt+ f        ++++ +k + +m+ey+l
  Aqcoe3G136600.1.p 110 FDVCD-GQTLIGYHKTFSFKnsqglMFEENDEVKISYIMNEYTL 152
                        88999.999***********7655435788889*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-2216182IPR003441NAC domain
PROSITE profilePS5100528.16719182IPR003441NAC domain
PfamPF023652.8E-1720152IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MKRNNKNKEE NVKDYSDVLP PGFRFNPTNQ ELVKYYLTKK VAEEPLPKLN VIKERTLYGK  60
EAEEPSQFFA GKSEEFLYFF TQVNKKFVNT NGNKMDRISG KGTWKMQNSF DVCDGQTLIG  120
YHKTFSFKNS QGLMFEENDE VKISYIMNEY TLKNPPPLSS SSSSSQQQQN QAEWTICKIR  180
KKVTTKKNDY NDQASLDKSS VSIRRKGKLQ ADSCKKRKRI DDAQTSLVNF SVSTRKGTKQ  240
ARTSKALASL PPTITTSDVG FLQKDHDNNL PSSWAVMPHQ PEQKPKPVHL CAESQLYIDY  300
DNDSETVPLA YALAYTPAVG TSIIPEVNFN LLEYSQQRQS EYMSWQDRNV AAQADNQEED  360
DVYPLNRRQN LMSKLLAGDD LNMLPNPTMP TPYLSH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-141919015172Stress-induced transcription factor NAC1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1203218RRKGKLQADSCKKRKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5CGF30.0A0A2G5CGF3_AQUCA; Uncharacterized protein
STRINGAquca_056_00046.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.11e-17NAC-domain protein 101