PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G172500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bZIP
Protein Properties Length: 408aa    MW: 43026 Da    PI: 6.242
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G172500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_173.62.8e-23306368163
                        XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                        e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL+++v++L++eN++Lk+e+++++ e+++l s++
  Aqcoe3G172500.1.p 306 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRVEVLKEENSTLKSEVSRIRSEYEQLVSQN 368
                        89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.9E-33197IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165964.9E-48135274No hitNo description
Gene3DG3DSA:1.20.5.1709.3E-20298367No hitNo description
PfamPF001701.5E-21306368IPR004827Basic-leucine zipper domain
SMARTSM003381.7E-23306370IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.691308371IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.0E-12309366No hitNo description
CDDcd147026.43E-24311361No hitNo description
PROSITE patternPS000360313328IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MGSGEEDTSA KSSSKSPVRQ EQPPTTSTAP VYPEWPAFQA YSPIPPHGFF HSSVAASPQA  60
HPYMWGAQHL MPPYGTPPPP YVAMYPPGGI YSHPSMPPGS HPFSPYAMPS VNGNAEASSG  120
AGGAEGDGKS SDGKEKSPLK RSKDSLGSLN MLTGKNNNEQ AKTSGLSTNG GVSHSAESAS  180
EGSSEGSDAN SQNDSQPKEG RGQDSLEGEA SQNGSAMRDS NNGALHASQH AVLNPTMAIM  240
PIPGAGIPGG VAGPTTNLNI GMDYWGTPTP SAMPAIRGKV PSTPVAGAVV PTGLVGSQSE  300
LWIQDERELK RQRRKQSNRE SARRSRLRKQ AECEELAQRV EVLKEENSTL KSEVSRIRSE  360
YEQLVSQNTS LKERLGENPV GHDGRNDQHS GNDDQQAGQA EQVQSSH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1322328RRSRLRK
2322329RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010261558.10.0PREDICTED: bZIP transcription factor 16 isoform X2
SwissprotQ501B21e-138BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A2G5ESS20.0A0A2G5ESS2_AQUCA; Uncharacterized protein
STRINGAquca_005_00580.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.14e-95basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]