PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G183200.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 529aa    MW: 58611.9 Da    PI: 5.4068
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G183200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.31.3e-13330372754
                        HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                        + Er+RR+++N +++ L+ l+P++     +K++ a+i+  A+eYIk+L
  Aqcoe3G183200.1.p 330 ATERQRREQLNGKYQALKNLVPNP-----TKNDRASIVHDAIEYIKEL 372
                        78**********************.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.202323372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-11329378IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.53E-14330388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.3E-11330372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-12330380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.21E-11332377No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    Send to blast
MGGIMYDDSC YYDNNTHDPN SITGVIGGDG GGFTSHQHQV VSNCSGLSPL LGGTTCSNTS  60
LEENLRISSF SLEELSNHQN HSNDAAAVAA ATMDFELEHE LNTHLMQDVL QDPDHLDQQN  120
INWDTKVQDM HDMNSQQAQQ YHHLNHDPGQ PIDLPYNLQS FNSTPFSNSS YAQTPTPDLL  180
NLFHLPRCSV SSMLPNSSIS FINPTGKNKQ SNFPSSLDFF GEHPTADGAS SASNALYDPP  240
LHLNLPPQQT PIFKELFHSL PHNYGLPSSR GTGSSFFGGM DERDQGLSGL YQDGDGRQFI  300
ETTSTLDFSR DMSGLGKGGE GKGGNKQPFA TERQRREQLN GKYQALKNLV PNPTKNDRAS  360
IVHDAIEYIK ELLRTVEELK ILVDKKRYGP ERSKKRKTED EATGDMESSS MKPHSFLTDR  420
EQSNGPSRAT WIQRKSKEAE VDVRIVEDEI TIKLIQRKKI NCLLPVSKIL DELQLDLLHV  480
SGGNIGDFYS FLFNTKIYEG SSVHGIAIAN KLIETVDKNY AAFQPGNF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010243136.10.0PREDICTED: transcription factor EAT1-like
RefseqXP_010243137.10.0PREDICTED: transcription factor EAT1-like
RefseqXP_010243138.10.0PREDICTED: transcription factor EAT1-like
TrEMBLA0A2G5C3M40.0A0A2G5C3M4_AQUCA; Uncharacterized protein
STRINGAquca_105_00005.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.11e-77bHLH family protein