PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G188400.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family C2H2
Protein Properties Length: 138aa    MW: 16299.4 Da    PI: 7.5009
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G188400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.4e-053655221
                       EETTTTEEESSHHHHHHHHH CS
            zf-C2H2  2 kCpdCgksFsrksnLkrHir 21
                       kC++C+  F+r ++Lk H  
  Aqcoe3G188400.1.p 36 KCKICSNQFRRTDDLKAHEE 55
                       7*****************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM0035539630IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.9743563IPR007087Zinc finger, C2H2
SMARTSM003552.13558IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002803758IPR007087Zinc finger, C2H2
SMARTSM003558.56790IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002806990IPR007087Zinc finger, C2H2
SMARTSM003555.795117IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028097118IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    Send to blast
MESDKLYCCN CTAEGFSNVF EIRKHYRNFH KGFDEKCKIC SNQFRRTDDL KAHEEDEHGK  60
KTEIVKMFCI HCKKGFKYKF GLKNHFERVH ADYDIKCMKC ANYFVSEIDK NEHVQLHHEA  120
TAKDVNCHED RAEQANL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G5DQC52e-47A0A2G5DQC5_AQUCA; Uncharacterized protein
STRINGAquca_016_00148.13e-48(Aquilegia coerulea)