PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G199000.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family NAC
Protein Properties Length: 222aa    MW: 25009.3 Da    PI: 6.9759
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G199000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM126.81.7e-39251553128
                NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkev 92 
                        +G++F+P+d+el+ eyL+ ++++++l+  + i evdiyk++P +L k   k + +++yfF++ +kky +g+r++r ++ +g+Wkatg+dk+v
  Aqcoe3G199000.1.p  25 MGYHFQPHDHELIAEYLAVRLKNHPLPP-NRIVEVDIYKYNPGELTKmVPKYDGSNMYFFTPMKKKYGKGSRPSRsTAGDGFWKATGRDKQV 115
                        69***********************999.77**************952344477799******************6666************* PP

                NAM  93 lsk.kgelvglkktLvfykg...rapkgektdWvmheyrl 128
                        lsk k+ ++glkktLvfy+g   r+++++ktdW+m+eyrl
  Aqcoe3G199000.1.p 116 LSKgKKLVIGLKKTLVFYRGdpkRKKDAKKTDWIMQEYRL 155
                        **9455569*********75444788899*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-4217179IPR003441NAC domain
PROSITE profilePS5100542.80423179IPR003441NAC domain
PfamPF023652.1E-2025155IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MVVAAAAAAA DDDFDYWDDL DNIGMGYHFQ PHDHELIAEY LAVRLKNHPL PPNRIVEVDI  60
YKYNPGELTK MVPKYDGSNM YFFTPMKKKY GKGSRPSRST AGDGFWKATG RDKQVLSKGK  120
KLVIGLKKTL VFYRGDPKRK KDAKKTDWIM QEYRLVDGAK NAKNDGNKLD DVLVKIYLKK  180
GGTSEKDGTD NQNQEDDAVD LYLDMDYLLN APSSESLEAI D*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-312218014169Stress-induced transcription factor NAC1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007048410.24e-42PREDICTED: NAC domain-containing protein 67
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.11e-37NAC domain containing protein 32