PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe3G208000.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

G2-like

Protein Properties

Length: 288aa MW: 32452.3 Da PI: 7.2952

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe3G208000.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.2	3.3e-32	22	76	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLH+rFv av++LGG++kAtPk++l++m++kgLtl+h+kSHLQkYRl Aqcoe3G208000.1.p 22 KPRLRWTAELHDRFVAAVTNLGGPDKATPKSVLRVMGLKGLTLYHLKSHLQKYRL 76 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	12.004	19	79	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	3.7E-31	19	77	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.0E-15	22	77	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.0E-23	22	77	IPR006447	Myb domain, plants
Pfam	PF00249	7.5E-8	24	75	IPR001005	SANT/Myb domain
Pfam	PF14379	4.8E-24	120	167	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence Send to blast
MEFGNSNSYE TAGGVILSRD PKPRLRWTAE LHDRFVAAVT NLGGPDKATP KSVLRVMGLK 60 GLTLYHLKSH LQKYRLGKQT QRDTKLDQSL DSAESSEGHS YMQSSGTTTT TPKVNNEGGF 120 QIAETLRYQI EVQRRLQEQL EVQKKLQMRI EAQGKYLQTI LEKAQKSLSS DINCPENLEA 180 TRDQITDFNL ALSGLMENMT QVNEEERKGD AIGKNSTVQH KKPHSSAFQL YQGEEEEKER 240 KEVKVKVEGG SLLLDLNMNG NYEFMGGNGN GNEYDTNIHT HRRQGWF*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	1e-19	22	78	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-19	22	78	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-19	22	78	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-19	22	78	1	57	Protein PHOSPHATE STARVATION RESPONSE 1
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Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00544	DAP	Transfer from AT5G45580	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010255718.1	1e-113	PREDICTED: myb family transcription factor PHL11 isoform X1
Refseq	XP_010255719.1	1e-113	PREDICTED: myb family transcription factor PHL11 isoform X1
Swissprot	C0SVS4	2e-74	PHLB_ARATH; Myb family transcription factor PHL11
TrEMBL	A0A2G5ESW8	0.0	A0A2G5ESW8_AQUCA; Uncharacterized protein
STRING	Aquca_005_00644.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	3e-58	G2-like family protein

Link Out ? help Back to Top
Phytozome	Aqcoe3G208000.1.p

Publications ? help Back to Top
Petridis A,Döll S,Nichelmann L,Bilger W,Mock HP Arabidopsis thaliana G2-LIKE FLAVONOID REGULATOR and BRASSINOSTEROID ENHANCED EXPRESSION1 are low-temperature regulators of flavonoid accumulation. New Phytol., 2016. 211(3): p. 912-25 [PMID:27125220]