PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe3G226300.1.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

G2-like

Protein Properties

Length: 324aa MW: 35934.4 Da PI: 8.2418

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe3G226300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.1	2.6e-30	32	86	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt++LH+rFv+av qLGG+++A Pk++ ++m+vkgLtl+h+kSHLQkYRl Aqcoe3G226300.1.p 32 KPRLRWTNDLHRRFVDAVMQLGGPKHAKPKALWRIMGVKGLTLYHLKSHLQKYRL 86 79****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.5E-29	29	88	IPR009057	Homeodomain-like
PROSITE profile	PS51294	9.066	29	89	IPR017930	Myb domain
SuperFamily	SSF46689	1.25E-15	31	87	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	7.1E-22	32	87	IPR006447	Myb domain, plants
Pfam	PF00249	1.3E-5	34	85	IPR001005	SANT/Myb domain
Pfam	PF14379	2.8E-8	130	175	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence Send to blast
MEQAMMLNNK QNQQKEQGNQ EPPSVILTSD AKPRLRWTND LHRRFVDAVM QLGGPKHAKP 60 KALWRIMGVK GLTLYHLKSH LQKYRLSTHL KKDWAEPTKT ATSTSYQVDS PRTNGSFGSF 120 LSSELNEEFD VSEALRKEIE GQRKIQLELE VEKRIQDRIS SEQRYLEHMI ERACQQHNQT 180 LRAAGGASNI PKQPEIPPTE VSAMRTWNPL GFYTFSSQTG PVEAVRPQVP VGEGFPTVHT 240 NTVKHSPNSN LTATSLIFPN ETSLAGGMNT ELDPRIPTGG MNLAGDDYFF WGVPDNGIPK 300 FDAPIMNQGG GGGFNGYSGC PTS*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	3e-16	32	89	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	3e-16	32	89	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	3e-16	32	89	1	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	3e-16	32	89	1	58	Protein PHOSPHATE STARVATION RESPONSE 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5CNB3	0.0	A0A2G5CNB3_AQUCA; Uncharacterized protein
STRING	Aquca_044_00135.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	4e-48	G2-like family protein

Link Out ? help Back to Top
Phytozome	Aqcoe3G226300.1.p