PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aqcoe3G230000.2.p

Organism

Aquilegia coerulea

Taxonomic ID

218851

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia

Family

FAR1

Protein Properties

Length: 367aa MW: 41132.4 Da PI: 7.7248

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aqcoe3G230000.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	71.2	2.4e-22	58	144	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Y +Y++e GF v++++skk ++ge+ + f Cs++gk+e+++kk + + + t+tgCkak++ ++ dgkw+vt+++l+HnHel+p Aqcoe3G230000.2.p 58 DYYVKYGNEKGFPVKRRSSKKG-DDGEVRWVIFACSRSGKTESTSKK---AFKMHHLTKTGCKAKINAALMPDGKWRVTSIVLDHNHELTP 144 59************998887.9999***********99888...99999*******************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.3E-19	58	144	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence Send to blast
MENEASQFED SSDRHIDEDT KLEDMISIDE DIEKNILEEK PRELELGMIF DSVGEVFDYY 60 VKYGNEKGFP VKRRSSKKGD DGEVRWVIFA CSRSGKTEST SKKAFKMHHL TKTGCKAKIN 120 AALMPDGKWR VTSIVLDHNH ELTPGKIRSQ KKNRTMGPHV KQKLEVKDQG SIMPTQNNAS 180 DEHKNERFGR MCNAFLHQVV DLAAGNEDKT RIVMQWIEQL SKELNKGDGD NQPTSLPLSQ 240 LYTSSTSDDI DSIAKESGIN CSLSADHGKS RLPIKRKQSN VEQTVGKKKE NNKKEKEGAN 300 GNIIREHTLE MDPIWGSIAM EFGGPQKSIL LKEPTGGSKA MEFRISHIPN VGSFPHGNHP 360 VTLTRT*

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence Send to blast

MENEASQFED SSDRHIDEDT KLEDMISIDE DIEKNILEEK PRELELGMIF DSVGEVFDYY  60
VKYGNEKGFP VKRRSSKKGD DGEVRWVIFA CSRSGKTEST SKKAFKMHHL TKTGCKAKIN  120
AALMPDGKWR VTSIVLDHNH ELTPGKIRSQ KKNRTMGPHV KQKLEVKDQG SIMPTQNNAS  180
DEHKNERFGR MCNAFLHQVV DLAAGNEDKT RIVMQWIEQL SKELNKGDGD NQPTSLPLSQ  240
LYTSSTSDDI DSIAKESGIN CSLSADHGKS RLPIKRKQSN VEQTVGKKKE NNKKEKEGAN  300
GNIIREHTLE MDPIWGSIAM EFGGPQKSIL LKEPTGGSKA MEFRISHIPN VGSFPHGNHP  360
VTLTRT*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G5D8Q3	0.0	A0A2G5D8Q3_AQUCA; Uncharacterized protein
STRING	Aquca_026_00385.1	0.0	(Aquilegia coerulea)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	5e-13	far-red elongated hypocotyls 3

Link Out ? help Back to Top
Phytozome	Aqcoe3G230000.2.p