PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G243500.1.p
Organism
Aquilegia coerulea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family Trihelix
Protein Properties Length: 404aa    MW: 44012.3 Da    PI: 9.7856
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G243500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix735.2e-2343132186
           trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                        +Wt++e+laLie + e++ +lrrg+lk+ +W+ev++ +    r    +++++qC++k+e+l+kry+ +k+++++  ++ ss++ +f++++
  Aqcoe3G243500.1.p  43 CWTHEETLALIESYHEKWYSLRRGNLKASHWQEVADSVarrcRFAIPSKTSVQCRHKIEKLRKRYRTEKQRAINAPNRFSSSWNFFKKMD 132
                        8***********************************9964333334489**************************9*************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.3E-2242134No hitNo description
PROSITE profilePS500906.60944104IPR017877Myb-like domain
SMARTSM005959.2E-751139IPR006578MADF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MSSHPSSISL SPSPTPTPSQ SQSQSQSPSV IKPPSSRRVP PPCWTHEETL ALIESYHEKW  60
YSLRRGNLKA SHWQEVADSV ARRCRFAIPS KTSVQCRHKI EKLRKRYRTE KQRAINAPNR  120
FSSSWNFFKK MDDMEKGPLL STTITTTTPI IDEDSEDDQD SEEDQDQDDV DEDDSHTHPH  180
HHPPHGIVNN VHYISTSATN AHRLIAAAAN GGSQSPVGVA SAGSGGFRFR IPSGSRTVPS  240
PLGSVKKPMN YARFDQIPNS VKPNVVHNPN LSPNPRFLNS SSVGGGGGSL SRSSVGYGNK  300
SDGIGGGGGG VGSGSGKVAS GGSKRGMDPI ADMVSSIRML GEKFVKMEEM KIGMAREMEQ  360
MRMDMEMKRT EMILDSQQRI VEAFAQGISG KKKMKRMPSP EES*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026401509.12e-92trihelix transcription factor ASIL2-like
TrEMBLA0A2G5CIB30.0A0A2G5CIB3_AQUCA; Uncharacterized protein
STRINGAquca_053_00088.10.0(Aquilegia coerulea)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.14e-39Trihelix family protein